RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 KCTD11Q693B1 232 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 PNCKQ6P2M8 343 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 C4orf22Q6V702 233 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 ARHGEF18Q6ZSZ5 1173 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 TMC3Q7Z5M5 1100 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 ATL2Q8NHH9 583 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 DTX3LQ8TDB6 740 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 ACTRT1Q8TDG2 376 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 LRRC45Q96CN5 670 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 APOOQ9BUR5 198 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 FSD1LQ9BXM9 530 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 TEX101Q9BY14 249 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 ZFYVE1Q9HBF4 777 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 RAD18Q9NS91 495 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 UBP1Q9NZI7 540 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL2A1-206ENST00000483376 ERI2A8K979 691 aaKnown RBP16.24■□□□□ 0.19
COL2A1-206ENST00000483376 PDE2AO00408 941 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-206ENST00000483376 TNFRSF10CO14798 259 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 PSMD3O43242 534 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 CBFA2T3O75081 653 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 CLDN7O95471 211 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 PCCBP05166 539 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 CEACAM1P13688 526 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 TCP1P17987 556 aaKnown RBP16.24■□□□□ 0.19
COL2A1-206ENST00000483376 KELP23276 732 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 HMGCLP35914 325 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 SPINT3P49223 89 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 THOP1P52888 689 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 HNRNPKP61978 463 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL2A1-206ENST00000483376 PTPRRQ15256 657 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 SIRPB2Q5JXA9 342 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 ADAMTSL4Q6UY14 1074 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 GLRX5Q86SX6 157 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 NAXDQ8IW45 347 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 PLA2G15Q8NCC3 412 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 IPMKQ8NFU5 416 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 BAHD1Q8TBE0 780 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-206ENST00000483376 BTN2A2Q8WVV5 523 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 C1orf54Q8WWF1 131 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 SMIM14Q96QK8 99 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 OSBPL9Q96SU4 736 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 ABCG8Q9H221 673 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 SLC32A1Q9H598 525 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 WDR26Q9H7D7 661 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 PKD2L2Q9NZM6 624 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 ZNF148Q9UQR1 794 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 ZNF711Q9Y462 761 aa16.24■□□□□ 0.19
COL2A1-206ENST00000483376 H3BM21 787 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 CACNB4O00305 520 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-206ENST00000483376 PPFIA2O75334 1257 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 METTL18O95568 372 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 SOD1P00441 154 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 BLKP51451 505 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 EIF2B5Q13144 721 aaKnown RBP16.23■□□□□ 0.19
COL2A1-206ENST00000483376 TPRG1LQ5T0D9 272 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 HENMT1Q5T8I9 393 aaKnown RBP16.23■□□□□ 0.19
COL2A1-206ENST00000483376 ZDHHC20Q5W0Z9 365 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 PAPD7Q5XG87 772 aaKnown RBP16.23■□□□□ 0.19
COL2A1-206ENST00000483376 PDPK2PQ6A1A2 396 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 LYSMD3Q7Z3D4 306 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 PRELID2Q8N945 189 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 FUBP1Q96AE4 644 aaKnown RBP16.23■□□□□ 0.19
COL2A1-206ENST00000483376 AP2M1Q96CW1 435 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 EID2BQ96D98 161 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 PCOLCE2Q9UKZ9 415 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 CSNK1G3Q9Y6M4 447 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 DGKBQ9Y6T7 804 aa16.23■□□□□ 0.19
COL2A1-206ENST00000483376 TP53BP1Q12888 1972 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-206ENST00000483376 TMEM131Q92545 1883 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 PGRMC1O00264 195 aaKnown RBP16.22■□□□□ 0.19
COL2A1-206ENST00000483376 PIAS2O75928 621 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 AP2A1O95782 977 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 MYCLP1P12525 358 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-206ENST00000483376 ACTN2P35609 894 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 FDFT1P37268 417 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 ERMP1Q7Z2K6 904 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 KDELC2Q7Z4H8 507 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 PELI3Q8N2H9 469 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 SDR16C5Q8N3Y7 309 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 WDR92Q96MX6 357 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 PLEKHG4BQ96PX9 1271 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 WDR24Q96S15 920 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 CDC6Q99741 560 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 LRRC40Q9H9A6 602 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 PHPT1Q9NRX4 125 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-206ENST00000483376 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL2A1-206ENST00000483376 PAK5Q9P286 719 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 OR1A2Q9Y585 309 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 SPO11Q9Y5K1 396 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 PCNX2A6NKB5 2137 aa16.22■□□□□ 0.19
COL2A1-206ENST00000483376 COL5A1P20908 1838 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-206ENST00000483376 K7ESM1 405 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 SH3BP5O60239 455 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 SUN1O94901 812 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 KCNK5O95279 499 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 DGKAP23743 735 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 CHRNA4P43681 627 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 GNG11P61952 73 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms