RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 NFKBIBQ15653 356 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 AMZ1Q400G9 498 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 FIGNQ5HY92 759 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ARMC12Q5T9G4 340 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 HGSNATQ68CP4 663 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 RAET1GQ6H3X3 334 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TSPAN33Q86UF1 283 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NRROSQ86YC3 692 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 GPBAR1Q8TDU6 330 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CPLX3Q8WVH0 158 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TEKT4Q8WW24 435 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SCRN2Q96FV2 425 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NUP85Q9BW27 656 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 GSDMCQ9BYG8 508 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SEMA4CQ9C0C4 833 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 RDH14Q9HBH5 336 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NT5MQ9NPB1 228 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 IP6K2Q9UHH9 426 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ANAPC7Q9UJX3 599 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 BZW2Q9Y6E2 419 aaKnown RBP16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ATMQ13315 3056 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CAPN8A6NHC0 703 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 RHPN2P1A8MT19 583 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 EFSO43281 561 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 B4GAT1O43505 415 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 FGF1P05230 155 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PDHA1P08559 390 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 AK4P27144 223 aaPredicted RBP16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ALDH4A1P30038 563 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 POLD2P49005 469 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 OR1D5P58170 312 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CDK3Q00526 305 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 B4GALNT1Q00973 533 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 BIRC2Q13490 618 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 RALGPS1Q5JS13 557 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PHF19Q5T6S3 580 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SLC30A9Q6PML9 568 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 USP53Q70EK8 1073 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 USP45Q70EL2 814 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TMPRSS9Q7Z410 1059 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ZDHHC1Q8WTX9 485 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PTCD2Q8WV60 388 aaKnown RBP16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CMKLR1Q99788 373 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SEMA3CQ99985 751 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 FRMD8Q9BZ67 464 aaPredicted RBP16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SEMA6CQ9H3T2 930 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TAAR2Q9P1P5 351 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CD84Q9UIB8 345 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SUFUQ9UMX1 484 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CFAP46Q8IYW2 2715 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PIEZO2Q9H5I5 2752 aa16.55■□□□□ 0.24
RAB11FIP3-209ENST00000483002 A0A087X0T9 212 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MYO1FO00160 1098 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PSMD11O00231 422 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NVLO15381 856 aaKnown RBP16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ECEL1O95672 775 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SERPING1P05155 500 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CD48P09326 243 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 FAM228BP0C875 321 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 IL4RP24394 825 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 GPR1P46091 355 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MAPK10P53779 464 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 FANCCQ00597 558 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SLC25A11Q02978 314 aaKnown RBP16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CCDC122Q5T0U0 273 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 DOK6Q6PKX4 331 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 RFLNAQ6ZTI6 216 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PIM3Q86V86 326 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NDUFAF2Q8N183 169 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NIPA2Q8N8Q9 360 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PIH1D2Q8WWB5 315 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TMEM159Q96B96 161 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SMIM14Q96QK8 99 aa16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MCCC1Q96RQ3 725 aaPredicted RBP16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TRNAU1APQ9NX07 287 aaKnown RBP16.54■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PRAMEF33A0A0G2JMD5 474 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 A0A1W2PQJ5 194 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PRAMEF10O60809 474 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CPNE6O95741 557 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CYP1A2P05177 515 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 KRT10P13645 584 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ETV5P41161 510 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CTBSQ01459 385 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 HADHQ16836 314 aaKnown RBP16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ATP13A4Q4VNC1 1196 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TECPR1Q7Z6L1 1165 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 C17orf82Q86X59 251 aaPredicted RBP16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 LRRC49Q8IUZ0 686 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SLITRK4Q8IW52 837 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TEX26Q8N6G2 289 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PATE1Q8WXA2 126 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SYN2Q92777 582 aaPredicted RBP16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 USP7Q93009 1102 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 AP2M1Q96CW1 435 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ABCG8Q9H221 673 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CBX8Q9HC52 389 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ACSL6Q9UKU0 697 aa16.53■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SLC17A4Q9Y2C5 497 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms