RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 EDNRBP24530 442 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 RXRGP48443 463 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 KCNC1P48547 511 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 RPL26P61254 145 aaKnown RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 BEX3Q00994 111 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CHRNB3Q05901 458 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 ZNF235Q14590 738 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 TAS2R42Q7RTR8 314 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 GPR180Q86V85 440 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CARM1Q86X55 608 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 FAM126BQ8IXS8 530 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CPSF7Q8N684 471 aaKnown RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 SEPT8Q92599 483 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 C1QTNF1Q9BXJ1 281 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 MUC3BQ9H195 1237 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 HIPK3Q9H422 1215 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 LTB4R2Q9NPC1 389 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 ENTPD7Q9NQZ7 604 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 MARCH4Q9P2E8 410 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 GJD2Q9UKL4 321 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 PNMA8BQ9ULN7 279 aaPredicted RBP12.7□□□□□ -0.38
VPS52-218ENST00000482399 ANGPTL3Q9Y5C1 460 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 AP3B1O00203 1094 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 PSMD3O43242 534 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 NDUFS3O75489 264 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 GLP2RO95838 553 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 GUCA1CO95843 209 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 OR4Q2P0C623 313 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 GSK3BP49841 420 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 SCNN1GP51170 649 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CLCNKBP51801 687 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 IL5RAQ01344 420 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 NR6A1Q15406 480 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 CYP2A13Q16696 494 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 ADCK1Q86TW2 530 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 METTL23Q86XA0 190 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 ELMO1Q92556 727 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 LRRC58Q96CX6 371 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 SMOQ99835 787 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 BDH2Q9BUT1 245 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 KIFC1Q9BW19 673 aa12.7□□□□□ -0.38
VPS52-218ENST00000482399 E5RI56 91 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 H3BMQ9 156 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 M0QZ92 97 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 COL6A2P12110 1019 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 ARSDP51689 593 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
VPS52-218ENST00000482399 SH3BP2P78314 561 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 LAPTM4AQ15012 233 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 PIWIL3Q7Z3Z3 882 aaKnown RBP12.69□□□□□ -0.38
VPS52-218ENST00000482399 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 ARL10Q8N8L6 244 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 SMG8Q8ND04 991 aaKnown RBP12.69□□□□□ -0.38
VPS52-218ENST00000482399 BHMTQ93088 406 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 ABHD8Q96I13 439 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 COG8Q96MW5 612 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 CRTAC1Q9NQ79 661 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 IPPQ9Y573 584 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 TBC1D4O60343 1298 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 XYLBO75191 536 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 ALDOCP09972 364 aaKnown RBP12.69□□□□□ -0.38
VPS52-218ENST00000482399 SLC2A3P11169 496 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 PRKACGP22612 351 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 PSMB9P28065 219 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 PCYT1AP49585 367 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 EMP3P54852 163 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 YBX1P67809 324 aaKnown RBP12.69□□□□□ -0.38
VPS52-218ENST00000482399 TXNL4AP83876 142 aaKnown RBP12.69□□□□□ -0.38
VPS52-218ENST00000482399 EFEMP1Q12805 493 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 FRA10AC1Q70Z53 315 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 GALNT5Q7Z7M9 940 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 HM13Q8TCT9 377 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 TMEM40Q8WWA1 233 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 TFAP2CQ92754 450 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 FAM162AQ96A26 154 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 MYLPFQ96A32 169 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
VPS52-218ENST00000482399 HACD3Q9P035 362 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 DNAJC15Q9Y5T4 150 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 SHROOM3Q8TF72 1996 aa12.69□□□□□ -0.38
VPS52-218ENST00000482399 TREHO43280 583 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CBFA2T3O75081 653 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CLASP2O75122 1294 aaKnown RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 BMXP51813 675 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CDKN2DP55273 166 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 UFM1P61960 85 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 GALNT2Q10471 571 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 TGFBIQ15582 683 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 TECRLQ5HYJ1 363 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 GLYATQ6IB77 296 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ZDHHC13Q8IUH4 622 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ABI1Q8IZP0 508 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 HS3ST5Q8IZT8 346 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 SFRP1Q8N474 314 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 481.5 ms