RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TEX51A0A1B0GUA7 166 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 GOLGA6CA6NDK9 693 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 GOLGA6BA6NDN3 693 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 NPIPB15A6NHN6 443 aaPredicted RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 D6RAR5 112 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 TK2O00142 265 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 NTN3O00634 580 aaPredicted RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 SPOPO43791 374 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 PRKCGP05129 697 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 IVLP07476 585 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 CD48P09326 243 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 GOLGA6DP0CG33 693 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 TGM2P21980 687 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 KDELR1P24390 212 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 CCKBRP32239 447 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 ETV3P41162 512 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 GPR3P46089 330 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 HADHBP55084 474 aaKnown RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 TMPRSS3P57727 454 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 MAXP61244 160 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 MESDQ14696 234 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 SPA17Q15506 151 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 LRRC66Q68CR7 880 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 PDPK2PQ6A1A2 396 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 SLC9A4Q6AI14 798 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 OGFOD3Q6PK18 319 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 CBARPQ8N350 705 aaPredicted RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 PGBD5Q8N414 524 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 PLA2G15Q8NCC3 412 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 FAM46DQ8NEK8 389 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 GPBAR1Q8TDU6 330 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 HNRNPLLQ8WVV9 542 aaKnown RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 PIH1D2Q8WWB5 315 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 UBL7Q96S82 380 aaPredicted RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 B3GNT4Q9C0J1 378 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 TCEAL2Q9H3H9 227 aaPredicted RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 DPEP2Q9H4A9 486 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 CARS2Q9HA77 564 aaKnown RBP11.43□□□□□ -0.58
CCM2-213ENST00000480658 PCDH9Q9HC56 1237 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 CYP4F12Q9HCS2 524 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 FGF22Q9HCT0 170 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 GOLGA6AQ9NYA3 693 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 DTLQ9NZJ0 730 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 MOSPD1Q9UJG1 213 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 SLC17A4Q9Y2C5 497 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 CHD6Q8TD26 2715 aa11.43□□□□□ -0.58
CCM2-213ENST00000480658 ZZEF1O43149 2961 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 TMEM202A6NGA9 273 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 KRT1P04264 644 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 RPLP0P05388 317 aaKnown RBP11.42□□□□□ -0.58
CCM2-213ENST00000480658 LHCGRP22888 699 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
CCM2-213ENST00000480658 INHBCP55103 352 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 C3orf38Q5JPI3 329 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 ZDHHC20Q5W0Z9 365 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 DENND2CQ68D51 928 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 GALNT13Q8IUC8 556 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 CCNJLQ8IV13 435 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 KCNE4Q8WWG9 221 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 OR1E3Q8WZA6 343 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 CCDC74AQ96AQ1 378 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 HIC2Q96JB3 615 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 SLC46A1Q96NT5 459 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 VAT1Q99536 393 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 CMKLR1Q99788 373 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 MLPHQ9BV36 600 aaPredicted RBP11.42□□□□□ -0.58
CCM2-213ENST00000480658 FRMD8Q9BZ67 464 aaPredicted RBP11.42□□□□□ -0.58
CCM2-213ENST00000480658 TRIM5Q9C035 493 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 SYNDIG1Q9H7V2 258 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCM2-213ENST00000480658 SIRPGQ9P1W8 387 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 SATB2Q9UPW6 733 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 PCDHB1Q9Y5F3 818 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 PCDHGA7Q9Y5G6 932 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 ENTPD2Q9Y5L3 495 aa11.42□□□□□ -0.58
CCM2-213ENST00000480658 ANKRD36A6QL64 1941 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 KNL1Q8NG31 2342 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 A0A0A6YYK5 440 aaPredicted RBP11.41□□□□□ -0.58
CCM2-213ENST00000480658 C1orf232A0A0U1RR37 186 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 RHPN2P1A8MT19 583 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 A8MX80 341 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 ANKRD66B4E2M5 251 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 MPOP05164 745 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 GM2AP17900 193 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 CD82P27701 267 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 STC1P52823 247 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 DCDC1P59894 354 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 GPLD1P80108 840 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 GBE1Q04446 702 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 AP1B1Q10567 949 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 HLTFQ14527 1009 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCM2-213ENST00000480658 NR1D2Q14995 579 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 TMEM164Q5U3C3 297 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 HSD11B1LQ7Z5J1 315 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 TECPR1Q7Z6L1 1165 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 CLEC14AQ86T13 490 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 NT5DC3Q86UY8 548 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 MARCH9Q86YJ5 346 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 TP53INP2Q8IXH6 220 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms