RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 YIPF6Q96EC8 236 aa10.65□□□□□ -0.7
SIK3-210ENST00000480468 CPB2Q96IY4 423 aa10.65□□□□□ -0.7
SIK3-210ENST00000480468 ZNF300Q96RE9 604 aaPredicted RBP10.65□□□□□ -0.7
SIK3-210ENST00000480468 SLIRPQ9GZT3 109 aaKnown RBP10.65□□□□□ -0.7
SIK3-210ENST00000480468 NTN4Q9HB63 628 aa10.65□□□□□ -0.7
SIK3-210ENST00000480468 MAGED2Q9UNF1 606 aaPredicted RBP10.65□□□□□ -0.7
SIK3-210ENST00000480468 PRELID1Q9Y255 219 aa10.65□□□□□ -0.7
SIK3-210ENST00000480468 NRXN2Q9P2S2 1712 aa10.65□□□□□ -0.7
SIK3-210ENST00000480468 A0A087X1B8 175 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 UPK1AO00322 258 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 NR5A2O00482 541 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 PPEF1O14829 653 aaPredicted RBP10.65□□□□□ -0.71
SIK3-210ENST00000480468 TBC1D4O60343 1298 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 TULP3O75386 442 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 SOAT2O75908 522 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 SUPT7LO94864 414 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 CCDC159P0C7I6 412 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 DNAJB2P25686 324 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 TKTL1P51854 596 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 EEFSECP57772 596 aaKnown RBP10.65□□□□□ -0.71
SIK3-210ENST00000480468 ORC1Q13415 861 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 SLC27A3Q5K4L6 730 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 CYHR1Q6ZMK1 362 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 VSIG10LQ86VR7 867 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 PROSER1Q86XN7 944 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 ZDHHC17Q8IUH5 632 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 CNTN4Q8IWV2 1026 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 LSM14AQ8ND56 463 aaKnown RBP10.65□□□□□ -0.71
SIK3-210ENST00000480468 PJA1Q8NG27 643 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 PSMA8Q8TAA3 256 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 FAR1Q8WVX9 515 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 SGCDQ92629 289 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 HTRA1Q92743 480 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 NXNL1Q96CM4 212 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 LRCH3Q96II8 777 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 EGLN2Q96KS0 407 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 HEXIM2Q96MH2 286 aaKnown RBP10.65□□□□□ -0.71
SIK3-210ENST00000480468 CHID1Q9BWS9 393 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 JPH1Q9HDC5 661 aaPredicted RBP10.65□□□□□ -0.71
SIK3-210ENST00000480468 PCDHGA8Q9Y5G5 932 aa10.65□□□□□ -0.71
SIK3-210ENST00000480468 ZFC3H1O60293 1989 aaKnown RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 TYW5A2RUC4 315 aaKnown RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 KLRG2A4D1S0 409 aaPredicted RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 AP3B1O00203 1094 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 RAD51BO15315 384 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 MFSD11O43934 449 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 MSCO60682 206 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 KATNA1O75449 491 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CCNKO75909 580 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 DLGAP3O95886 979 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 PFKMP08237 780 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 F7P08709 466 aaPredicted RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 ALDOCP09972 364 aaKnown RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 STMN1P16949 149 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CAPN3P20807 821 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CYP3A5P20815 502 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 ARL4AP40617 200 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 SNX16P57768 344 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 ZIK1Q3SY52 487 aaPredicted RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 AGAP6Q5VW22 663 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 KCTD11Q693B1 232 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 RFPL4BQ6ZWI9 263 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 BEND5Q7L4P6 421 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 GLMNQ92990 594 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 TRIM63Q969Q1 353 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 AGAP4Q96P64 663 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CEP41Q9BYV8 373 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 ASPSCR1Q9BZE9 553 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 ALG2Q9H553 416 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 TNFRSF12AQ9NP84 129 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 FAM118AQ9NWS6 357 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 SIX4Q9UIU6 781 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 ZNF221Q9UK13 617 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 PCDHB3Q9Y5E6 796 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 N6AMT1Q9Y5N5 214 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 A3GALT2U3KPV4 340 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 SLC1A7O00341 560 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 GABBR2O75899 941 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 IPO13O94829 963 aaKnown RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 ARSAP15289 507 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 YWHAQP27348 245 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 HTR1EP28566 365 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 ATICP31939 592 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 INCA1Q0VD86 236 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CAPSQ13938 189 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CDK10Q15131 360 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CATSPEREQ5SY80 951 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 TRAPPC3LQ5T215 181 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 OTUD3Q5T2D3 398 aaPredicted RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 ARHGEF16Q5VV41 709 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 STEAP3Q658P3 488 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 STRADAQ7RTN6 431 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 ZBTB33Q86T24 672 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 FAM35AQ86V20 835 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 P2RY8Q86VZ1 359 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 SLC41A1Q8IVJ1 513 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 CDAN1Q8IWY9 1227 aa10.64□□□□□ -0.71
SIK3-210ENST00000480468 DCP1BQ8IZD4 617 aaKnown RBP10.64□□□□□ -0.71
SIK3-210ENST00000480468 MIER2Q8N344 545 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms