RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 NFKBIL1Q9UBC1 381 aaPredicted RBP19.72■□□□□ 0.75
LIME1-205ENST00000480139 CA5BQ9Y2D0 317 aa19.72■□□□□ 0.75
LIME1-205ENST00000480139 ADAMTS9Q9P2N4 1935 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 A0A0U1RQS6 177 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 USP12O75317 370 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 THEGLP0DJG4 465 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 TEAD1P28347 426 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 HMGCLP35914 325 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 CTSKP43235 329 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 SPINT3P49223 89 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 BNC1Q01954 994 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 MSLNQ13421 630 aaPredicted RBP19.71■□□□□ 0.75
LIME1-205ENST00000480139 OLIG2Q13516 323 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 SPARCL1Q14515 664 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 LAYNQ6UX15 382 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 ZNF572Q7Z3I7 529 aaPredicted RBP19.71■□□□□ 0.75
LIME1-205ENST00000480139 TAB3Q8N5C8 712 aaPredicted RBP19.71■□□□□ 0.75
LIME1-205ENST00000480139 OR13H1Q8NG92 308 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 C19orf43Q9BQ61 176 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 APOL2Q9BQE5 337 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 GPR63Q9BZJ6 419 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 RAD18Q9NS91 495 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 CDC23Q9UJX2 597 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 SHOC2Q9UQ13 582 aa19.71■□□□□ 0.75
LIME1-205ENST00000480139 PYGLP06737 847 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 APRTP07741 180 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 TSHRP16473 764 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 TRIM23P36406 574 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 MAGEA6P43360 314 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 LMAN1P49257 510 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 DCDC1P59894 354 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 BASP1P80723 227 aaKnown RBP19.7■□□□□ 0.74
LIME1-205ENST00000480139 CDK16Q00536 496 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 KIF19Q2TAC6 998 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 Q6ZSR6 202 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 SYDE1Q6ZW31 735 aaPredicted RBP19.7■□□□□ 0.74
LIME1-205ENST00000480139 GLT6D1Q7Z4J2 308 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 PTAR1Q7Z6K3 402 aaPredicted RBP19.7■□□□□ 0.74
LIME1-205ENST00000480139 TTC30BQ8N4P2 665 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 BRSK1Q8TDC3 778 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 BLOC1S5Q8TDH9 187 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 ABCG8Q9H221 673 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 ERVMER34-1Q9H9K5 563 aa19.7■□□□□ 0.74
LIME1-205ENST00000480139 ZNF106Q9H2Y7 1883 aaKnown RBP19.7■□□□□ 0.74
LIME1-205ENST00000480139 TMEM131Q92545 1883 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 DFNA5O60443 496 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 PPFIA2O75334 1257 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 PCCBP05166 539 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 HOXC4P09017 264 aaPredicted RBP19.69■□□□□ 0.74
LIME1-205ENST00000480139 TPSB2P20231 275 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 PTGIRP43119 386 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 PDE1BQ01064 536 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 CDH17Q12864 832 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 GPS1Q13098 491 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 PTK6Q13882 451 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 TUBB2AQ13885 445 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 INPP5AQ14642 412 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 TAF1AQ15573 450 aaPredicted RBP19.69■□□□□ 0.74
LIME1-205ENST00000480139 TRIP13Q15645 432 aaPredicted RBP19.69■□□□□ 0.74
LIME1-205ENST00000480139 TPSAB1Q15661 275 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 ZDHHC20Q5W0Z9 365 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 PNCKQ6P2M8 343 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 SLC22A18ASQ8N1D0 253 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 OXR1Q8N573 874 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 PLA2G15Q8NCC3 412 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 SPATA4Q8NEY3 305 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 AP2M1Q96CW1 435 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 TUBB2BQ9BVA1 445 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 GDF3Q9NR23 364 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 SNX11Q9Y5W9 270 aa19.69■□□□□ 0.74
LIME1-205ENST00000480139 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.69■□□□□ 0.74
LIME1-205ENST00000480139 MYLKQ15746 1914 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 AP3B1O00203 1094 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 AURKAO14965 403 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 CRTAMO95727 393 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 CER1O95813 267 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 CKAP4Q07065 602 aaKnown RBP19.68■□□□□ 0.74
LIME1-205ENST00000480139 DHX34Q14147 1143 aaKnown RBP19.68■□□□□ 0.74
LIME1-205ENST00000480139 PPP1R7Q15435 360 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 ZNF423Q2M1K9 1284 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 AASDHQ4L235 1098 aaPredicted RBP19.68■□□□□ 0.74
LIME1-205ENST00000480139 HENMT1Q5T8I9 393 aaKnown RBP19.68■□□□□ 0.74
LIME1-205ENST00000480139 RFLNAQ6ZTI6 216 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 ALYREFQ86V81 257 aaKnown RBP19.68■□□□□ 0.74
LIME1-205ENST00000480139 SPATS2Q86XZ4 545 aaKnown RBP19.68■□□□□ 0.74
LIME1-205ENST00000480139 KLHL7Q8IXQ5 586 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 KIF18AQ8NI77 898 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 DTX3LQ8TDB6 740 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 PLEKHG4BQ96PX9 1271 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 APOOQ9BUR5 198 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 EDEM2Q9BV94 578 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 FAM83DQ9H4H8 585 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 CASS4Q9NQ75 786 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 FSCN3Q9NQT6 498 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 IL17CQ9P0M4 197 aa19.68■□□□□ 0.74
LIME1-205ENST00000480139 SPTY2D1-AS1A0A0U1RR47 76 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 C2orf81A6NN90 581 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 URI1O94763 535 aaPredicted RBP19.67■□□□□ 0.74
LIME1-205ENST00000480139 SOD1P00441 154 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 VPS41P49754 854 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms