RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SLC30A3Q99726 388 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 SLC29A1Q99808 456 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 MFSD1Q9H3U5 465 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 AKTIPQ9H8T0 292 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 RNF186Q9NXI6 227 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 PCDH10Q9P2E7 1040 aa10.81□□□□□ -0.68
VPS52-217ENST00000478934 IGLV3-10A0A075B6K4 115 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PRSS51A0A1B0GVH4 220 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 ZNF839A8K0R7 811 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 ADAM12O43184 909 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 SLC7A4O43246 635 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 TPST1O60507 370 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 TIPRLO75663 272 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 CDK14O94921 469 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 RBP1P09455 135 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 MTHFD2P13995 350 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 CKMT2P17540 419 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 CES1P23141 567 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PRDX3P30048 256 aaKnown RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 SGSHP51688 502 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 APLP1P51693 650 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 NRG1Q02297 640 aaPredicted RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 HERC3Q15034 1050 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 GEN1Q17RS7 908 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 MYLK3Q32MK0 819 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PRSS55Q6UWB4 352 aaPredicted RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 LARP4Q71RC2 724 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS52-217ENST00000478934 SLC24A5Q71RS6 500 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 MARVELD2Q8N4S9 558 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 CALML6Q8TD86 181 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 SLCO4A1Q96BD0 722 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 BTN2A3PQ96KV6 586 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PRICKLE1Q96MT3 831 aaPredicted RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 BTBD9Q96Q07 612 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 NOL11Q9H8H0 719 aaKnown RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 MID1IP1Q9NPA3 183 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 TIMM22Q9Y584 194 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 FNDC1Q4ZHG4 1894 aaPredicted RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 FAM149AA5PLN7 773 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PLOD2O00469 737 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 ENPP3O14638 875 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 GLP2RO95838 553 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 LINC00032P0C843 101 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 HTR7P34969 479 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 SCNN1BP51168 640 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 CAPRIN1Q14444 709 aaKnown RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 TRIP4Q15650 581 aaPredicted RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 SLC14A2Q15849 920 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PLA2G4EQ3MJ16 856 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 VPS26BQ4G0F5 336 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 SETMARQ53H47 684 aaPredicted RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 RTP2Q5QGT7 225 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 KLHDC10Q6PID8 442 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PAQR3Q6TCH7 311 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 ATP6V0D2Q8N8Y2 350 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 ZFP28Q8NHY6 868 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 NUDT8Q8WV74 236 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 PPWD1Q96BP3 646 aaKnown RBP10.8□□□□□ -0.68
VPS52-217ENST00000478934 RANBP9Q96S59 729 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 TUBB1Q9H4B7 451 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 FBXO44Q9H4M3 255 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 BPIFA1Q9NP55 256 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 EGFL7Q9UHF1 273 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 MED16Q9Y2X0 877 aa10.8□□□□□ -0.68
VPS52-217ENST00000478934 hCG_2014768A0A024R1R8 64 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 TRIM38O00635 465 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 MRASO14807 208 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 PIP5K1BO14986 540 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 DENRO43583 198 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 OR1I1O60431 355 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 TSPAN3O60637 253 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 GJB5O95377 273 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 HSPA1AP0DMV8 641 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 HSPA1BP0DMV9 641 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 PCSK6P29122 969 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 AGTR2P50052 363 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 SLC7A2P52569 658 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 HK2P52789 917 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 XIAPP98170 497 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 ZNF235Q14590 738 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 SETD3Q86TU7 594 aaPredicted RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 TICAM1Q8IUC6 712 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 HERC6Q8IVU3 1022 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 DDIASQ8IXT1 998 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 WBP2Q969T9 261 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 TMIGD2Q96BF3 282 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 TADA1Q96BN2 335 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 C19orf60Q96EN9 201 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 FAM193BQ96PV7 902 aaPredicted RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 LIN28AQ9H9Z2 209 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 EML4Q9HC35 981 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 SEMA4BQ9NPR2 832 aaPredicted RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 GKN1Q9NS71 199 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 VPS28Q9UK41 221 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 AP4S1Q9Y587 144 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 PCDHGC4Q9Y5F7 938 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 ZFC3H1O60293 1989 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms