RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 BAK1Q16611 211 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CYP2A13Q16696 494 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PABPC1LQ4VXU2 614 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF805Q5CZA5 627 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 FSCBQ5H9T9 825 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PLAC9Q5JTB6 97 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SAPCD1Q5SSQ6 148 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RARS2Q5T160 578 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ERMARDQ5T6L9 678 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RIPPLY2Q5TAB7 128 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PTRHD1Q6GMV3 140 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SIGIRRQ6IA17 410 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 NFRKBQ6P4R8 1299 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PET117Q6UWS5 81 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM83HQ6ZRV2 1179 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 DOK3Q7L591 496 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 OTOAQ7RTW8 1153 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 TMCO2Q7Z6W1 182 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PXKQ7Z7A4 578 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 VASH2Q86V25 355 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 C2CD5Q86YS7 1000 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ZDHHC17Q8IUH5 632 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF679Q8IYX0 411 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PQLC1Q8N2U9 271 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SLC43A2Q8N370 569 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SRBD1Q8N5C6 995 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CSGALNACT2Q8N6G5 542 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ATAD1Q8NBU5 361 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SETD9Q8NE22 299 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CMASQ8NFW8 434 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PAQR8Q8TEZ7 354 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SCFD1Q8WVM8 642 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 NRG4Q8WWG1 115 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ATL1Q8WXF7 558 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ZKSCAN4Q969J2 545 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RHBDF1Q96CC6 855 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 EID2BQ96D98 161 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CHMP6Q96FZ7 201 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 MED30Q96HR3 178 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PGBD1Q96JS3 809 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RAB3IPQ96QF0 476 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PRAM1Q96QH2 718 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 AGAP2Q99490 1192 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM118BQ9BPY3 351 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SYT17Q9BSW7 474 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 MLPHQ9BV36 600 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 GPR87Q9BY21 358 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PARD6BQ9BYG5 372 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 DCLK3Q9C098 648 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 MUC13Q9H3R2 512 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CENPHQ9H3R5 247 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 MANSC1Q9H8J5 431 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PARVBQ9HBI1 364 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 EIF2B3Q9NR50 452 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 LANCL2Q9NS86 450 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM120CQ9NX05 1096 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SOHLH2Q9NX45 425 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 TMOD3Q9NYL9 352 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 MIS18AQ9NYP9 233 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 LRFN1Q9P244 771 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RCOR3Q9P2K3 495 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 THEGQ9P2T0 379 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CAPN11Q9UMQ6 739 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 STX8Q9UNK0 236 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CHMP2BQ9UQN3 213 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 BTBD3Q9Y2F9 522 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 BZW2Q9Y6E2 419 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PIAS3Q9Y6X2 628 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 LTBP4Q8N2S1 1624 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 KDM5DQ9BY66 1539 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 A2MP01023 1474 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PLEKHH2Q8IVE3 1493 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CNTLNQ9NXG0 1405 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ZMYM3Q14202 1370 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 MTUS2Q5JR59 1369 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CCNB3Q8WWL7 1395 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ELP1O95163 1332 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8QA0A0J9YX86 632 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8OA6NCC3 632 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA6L9A6NEM1 432 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 OR6C75A6NL08 312 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 TMEM210A6NLX4 147 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ERVV-2B6SEH9 535 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8NF8WBI6 632 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 DNALI1O14645 258 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PCDH17O14917 1159 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF263O14978 683 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 ATP2A1O14983 1001 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 VILLO15195 856 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 VEGFDO43915 354 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 MYO1DO94832 1006 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SCAF4O95104 1147 aaKnown RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 CCNDBP1O95273 360 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 SIX3O95343 332 aaPredicted RBP3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 PRAMEF12O95522 483 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 METTL18O95568 372 aa3.55□□□□□ -1.84
FNDC3B-209ENST00000478016 IL1AP01583 271 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms