RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TUBGCP6Q96RT7 1819 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 SCN7AQ01118 1682 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 N4BP2Q86UW6 1770 aaPredicted RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 A0A0B4J293 547 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 C17orf102A2RUQ5 167 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 CCNT1O60563 726 aaKnown RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 KRT38O76015 456 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 SOX30O94993 753 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 AFPP02771 609 aaKnown RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 MYZAPP0CAP1 466 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 CKMT1AP12532 417 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 GPTP24298 496 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 RGS19P49795 217 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 MVDP53602 400 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 CYP4A11Q02928 519 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 POU5F1BQ06416 359 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 MVPQ14764 893 aaKnown RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 ANKRD1Q15327 319 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 PARP10Q53GL7 1025 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 CBWD5Q5RIA9 395 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 C20orf194Q5TEA3 1177 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 WBP2NLQ6ICG8 309 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 AADACL2Q6P093 401 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 CLEC4GQ6UXB4 293 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 BBS12Q6ZW61 710 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 PPP1R42Q7Z4L9 355 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 C2CD5Q86YS7 1000 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 CPXCR1Q8N123 301 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 MUC20Q8N307 709 aaPredicted RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 SCAIQ8N9R8 606 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 GPT2Q8TD30 523 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 HERVK_113Q902F9 699 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 RILPL2Q969X0 211 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 TMEM18Q96B42 140 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 ZSCAN31Q96LW9 406 aaPredicted RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 PKP4Q99569 1192 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 SDF2L1Q9HCN8 221 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 CWC25Q9NXE8 425 aaPredicted RBP4.23□□□□□ -1.73
UBR3-209ENST00000477461 TNNQ9UQP3 1299 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 NIP7Q9Y221 180 aaKnown RBP eCLIP4.23□□□□□ -1.73
UBR3-209ENST00000477461 DNAJC16Q9Y2G8 782 aa4.23□□□□□ -1.73
UBR3-209ENST00000477461 USP42Q9H9J4 1324 aaKnown RBP4.22□□□□□ -1.73
UBR3-209ENST00000477461 ATP10DQ9P241 1426 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 IGHV4-28A0A0C4DH34 117 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 TSPAN3O60637 253 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 UMODP07911 640 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 CSF1P09603 554 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 UBTFL1P0CB47 393 aaPredicted RBP4.22□□□□□ -1.73
UBR3-209ENST00000477461 CYP4B1P13584 511 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 ARSAP15289 507 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 MXI1P50539 228 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 DDR1Q08345 913 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 BEND3Q5T5X7 828 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 MAP3K21Q5TCX8 1036 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 SMIM5Q71RC9 77 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 NBPF5PQ86XG9 351 aaPredicted RBP4.22□□□□□ -1.73
UBR3-209ENST00000477461 SMAP1Q8IYB5 467 aaPredicted RBP4.22□□□□□ -1.73
UBR3-209ENST00000477461 TEX45Q8NA69 505 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 CCDC191Q8NCU4 936 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 EXOC6Q8TAG9 804 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 NEK9Q8TD19 979 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 HDAC7Q8WUI4 952 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 ATOH1Q92858 354 aaPredicted RBP4.22□□□□□ -1.73
UBR3-209ENST00000477461 SH3KBP1Q96B97 665 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 MASTLQ96GX5 879 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 ADGRG7Q96K78 797 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 FRG2BQ96QU4 278 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 TWNKQ96RR1 684 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 UTP14AQ9BVJ6 771 aaKnown RBP4.22□□□□□ -1.73
UBR3-209ENST00000477461 HERC2P3Q9BVR0 1158 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 NPFFR1Q9GZQ6 430 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 NYXQ9GZU5 481 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 THAP1Q9NVV9 213 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 UPB1Q9UBR1 384 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 PGAP2Q9UHJ9 254 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 TRMT112Q9UI30 125 aaKnown RBP4.22□□□□□ -1.73
UBR3-209ENST00000477461 GJD2Q9UKL4 321 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 OSGIN2Q9Y236 505 aa4.22□□□□□ -1.73
UBR3-209ENST00000477461 MYH3P11055 1940 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 A0A1B0GVM2 712 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 STX16-NPEPL1H3BU86 382 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 STX16O14662 325 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 PCCAP05165 728 aaPredicted RBP4.21□□□□□ -1.74
UBR3-209ENST00000477461 IGKV5-2P06315 115 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 F7P08709 466 aaPredicted RBP4.21□□□□□ -1.74
UBR3-209ENST00000477461 GJC1P36383 396 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 SKIV2L2P42285 1042 aaKnown RBP4.21□□□□□ -1.74
UBR3-209ENST00000477461 MYBPHQ13203 477 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 BIRC3Q13489 604 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 GCKRQ14397 625 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 TBC1D9BQ66K14 1250 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 FBXL22Q6P050 247 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 ZNF354CQ86Y25 554 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 BRSK2Q8IWQ3 736 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 ZDHHC23Q8IYP9 409 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 ZNF34Q8IZ26 560 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 PGBD5Q8N414 524 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 AGO1Q9UL18 857 aaKnown RBP4.21□□□□□ -1.74
UBR3-209ENST00000477461 CARMIL3Q8ND23 1372 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms