RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TNFRSF10CO14798 259 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 ECEL1O95672 775 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 SERPINC1P01008 464 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 MYCLP1P12525 358 aaPredicted RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 CCL4P13236 92 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 CCNB1P14635 433 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 WT1P19544 449 aaPredicted RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 PTMSP20962 102 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 KELP23276 732 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 CCKBRP32239 447 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 PCK1P35558 622 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 MMP13P45452 471 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 ZNF165P49910 485 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 CYP4F2P78329 520 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 ZFP36L1Q07352 338 aaKnown RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 ITKQ08881 620 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 NR1I3Q14994 352 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 C16orf72Q14CZ0 275 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 IQCB1Q15051 598 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 HGSNATQ68CP4 663 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 PPP1R2P3Q6NXS1 205 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 ZNF761Q86XN6 746 aaPredicted RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 PSTKQ8IV42 348 aaKnown RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 ATPAF2Q8N5M1 289 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 EXD3Q8N9H8 876 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 GPBAR1Q8TDU6 330 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 ZDHHC1Q8WTX9 485 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 USP7Q93009 1102 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 SCAMP4Q969E2 229 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 PMEPA1Q969W9 287 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 CCDC97Q96F63 343 aaPredicted RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 DTD2Q96FN9 168 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 TMEM74Q96NL1 305 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 AGAP2Q99490 1192 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 MGME1Q9BQP7 344 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 BPIFA3Q9BQP9 254 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 TEX101Q9BY14 249 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 FRMD8Q9BZ67 464 aaPredicted RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 ISCUQ9H1K1 167 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 MRPL47Q9HD33 250 aaKnown RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 PHPT1Q9NRX4 125 aaPredicted RBP11.65□□□□□ -0.54
VARS2-208ENST00000477052 TAAR2Q9P1P5 351 aa11.65□□□□□ -0.54
VARS2-208ENST00000477052 AHCTF1Q8WYP5 2266 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 A0A1W2PQC6 194 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 RHPN2P1A8MT19 583 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 C9orf172C9J069 976 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 MFSD11O43934 449 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 SOCS5O75159 536 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 PGLSO95336 258 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 SOD1P00441 154 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 HOXC4P09017 264 aaPredicted RBP11.64□□□□□ -0.55
VARS2-208ENST00000477052 IL4RP24394 825 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 CDH6P55285 790 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 CDK3Q00526 305 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 CTBSQ01459 385 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 DSC2Q02487 901 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 SLC25A11Q02978 314 aaKnown RBP11.64□□□□□ -0.55
VARS2-208ENST00000477052 KRT81Q14533 505 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 MAP9Q49MG5 647 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 BOLA3Q53S33 107 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 MARC1Q5VT66 337 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 ZNF574Q6ZN55 896 aaPredicted RBP11.64□□□□□ -0.55
VARS2-208ENST00000477052 SLITRK4Q8IW52 837 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 CBARPQ8N350 705 aaPredicted RBP11.64□□□□□ -0.55
VARS2-208ENST00000477052 LZTR1Q8N653 840 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 OR6C4Q8NGE1 309 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 SNRNP27Q8WVK2 155 aaKnown RBP11.64□□□□□ -0.55
VARS2-208ENST00000477052 PIH1D2Q8WWB5 315 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 EXTL1Q92935 676 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 SEMA3CQ99985 751 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 NUP85Q9BW27 656 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 ABCG8Q9H221 673 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 TMEM9Q9P0T7 183 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 ANAPC7Q9UJX3 599 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 PHTF1Q9UMS5 762 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 PRKAB1Q9Y478 270 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 TTLL3Q9Y4R7 772 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 PCDHGA7Q9Y5G6 932 aa11.64□□□□□ -0.55
VARS2-208ENST00000477052 PCYT1BQ9Y5K3 369 aaPredicted RBP11.64□□□□□ -0.55
VARS2-208ENST00000477052 A0A087X0T9 212 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 PPM1DO15297 605 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 INPP4BO15327 924 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 FAM228BP0C875 321 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 MYBL1P10243 752 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 CYP2A6P11509 494 aaPredicted RBP11.63□□□□□ -0.55
VARS2-208ENST00000477052 CD1CP29017 333 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 ADCY8P40145 1251 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 GPR1P46091 355 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 NFKB2Q00653 900 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 ILF3Q12906 894 aaKnown RBP eCLIP11.63□□□□□ -0.55
VARS2-208ENST00000477052 LINC00303Q3SY05 128 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 ARMC12Q5T9G4 340 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 LRRC66Q68CR7 880 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 TECPR1Q7Z6L1 1165 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 LUZP1Q86V48 1076 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 NAGSQ8N159 534 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 KIAA1524Q8TCG1 905 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms