RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 KCTD3Q9Y597 815 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 KCNMB2Q9Y691 235 aa11.36□□□□□ -0.59
BRCA1-213ENST00000476777 A8MX80 341 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 J3KR12 359 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 PRAMEF11O60813 436 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 STK17BO94768 372 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 MMEP08473 750 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 TCN2P20062 427 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 SERPINA4P29622 427 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 ADCY8P40145 1251 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 GPLD1P80108 840 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 ACOX1Q15067 660 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 FHL5Q5TD97 284 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 CAPRIN2Q6IMN6 1127 aaKnown RBP11.35□□□□□ -0.59
BRCA1-213ENST00000476777 CEACAM20Q6UY09 585 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 SLFN11Q7Z7L1 901 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 SRLQ86TD4 932 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 HEATR4Q86WZ0 1026 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 ZPBPQ9BS86 351 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 TRIT1Q9H3H1 467 aaKnown RBP11.35□□□□□ -0.59
BRCA1-213ENST00000476777 LRRC19Q9H756 370 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 PRDM8Q9NQV8 689 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 FBXO8Q9NRD0 319 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 SLC17A4Q9Y2C5 497 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 FHOD1Q9Y613 1164 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 MRPS18BQ9Y676 258 aaKnown RBP11.35□□□□□ -0.59
BRCA1-213ENST00000476777 ITPR3Q14573 2671 aa11.35□□□□□ -0.59
BRCA1-213ENST00000476777 POLEQ07864 2286 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 OTOGQ6ZRI0 2925 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 A8MU76 341 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-213ENST00000476777 DLGAP3O95886 979 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 RNF224P0DH78 156 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 GNLYP22749 145 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 MMP8P22894 467 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 F8A1P23610 371 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 STAT5AP42229 794 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 FASLGP48023 281 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 POLD2P49005 469 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 POLR2LP62875 67 aaKnown RBP11.34□□□□□ -0.59
BRCA1-213ENST00000476777 CDK3Q00526 305 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 PEX6Q13608 980 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 SNAP47Q5SQN1 464 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 ASB18Q6ZVZ8 466 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 KDELC2Q7Z4H8 507 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 ZNF761Q86XN6 746 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-213ENST00000476777 CCDC13Q8IYE1 715 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
BRCA1-213ENST00000476777 GALNT11Q8NCW6 608 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 EPS8L1Q8TE68 723 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 SSC4DQ8WTU2 575 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 NUS1Q96E22 293 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 NSMCE3Q96MG7 304 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 NAA15Q9BXJ9 866 aaKnown RBP11.34□□□□□ -0.59
BRCA1-213ENST00000476777 CATSPERBQ9H7T0 1116 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 APMAPQ9HDC9 416 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 B4GALT6Q9UBX8 382 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 PLEKHM1Q9Y4G2 1056 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 APCP25054 2843 aa11.34□□□□□ -0.59
BRCA1-213ENST00000476777 DIDO1Q9BTC0 2240 aaKnown RBP11.33□□□□□ -0.59
BRCA1-213ENST00000476777 F8P00451 2351 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 MKRN2OSH3BPM6 223 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 CREB3O43889 395 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 SEMA7AO75326 666 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 VPS4BO75351 444 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 CYP1A1P04798 512 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 IVLP07476 585 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 ERCC5P28715 1186 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 MAN1A1P33908 653 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 RFC1P35251 1148 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 ACTR1BP42025 376 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 ACTR1AP61163 376 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 BCL2L1Q07817 233 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 CNGA3Q16281 694 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 KLHDC7AQ5VTJ3 777 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 WDR74Q6RFH5 385 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 CBARPQ8N350 705 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 ESX1Q8N693 406 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 OR10G6Q8NH81 332 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 SCARF2Q96GP6 870 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 AHCYL2Q96HN2 611 aaKnown RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 ZMYND15Q9H091 742 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 NOCTQ9UK39 431 aaKnown RBP11.33□□□□□ -0.6
BRCA1-213ENST00000476777 VPS4AQ9UN37 437 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 RPS6KL1Q9Y6S9 549 aa11.33□□□□□ -0.6
BRCA1-213ENST00000476777 MTORP42345 2549 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-213ENST00000476777 PALMO75781 387 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 PDGFAP04085 211 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 FURINP09958 794 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 PYGBP11216 843 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 KRT3P12035 628 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 TEAD1P28347 426 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 ETV3P41162 512 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 PAPOLAP51003 745 aaKnown RBP11.32□□□□□ -0.6
BRCA1-213ENST00000476777 NDST2P52849 883 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 NSUN2Q08J23 767 aaKnown RBP eCLIP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms