RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SH2D4AQ9H788 454 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 PPP1R3EQ9H7J1 279 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 ZNF580Q9UK33 172 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 MAU2Q9Y6X3 613 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 ATXN2Q99700 1313 aaKnown RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 ANKRD18BA2A2Z9 1011 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 GTPBP1O00178 669 aaKnown RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 SMAD6O43541 496 aaKnown RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 NDUFS7O75251 213 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 NDUFS3O75489 264 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 FTCDO95954 541 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 NGFRP08138 427 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 DDX5P17844 614 aaKnown RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 PIK3CAP42336 1068 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 CLCN3P51790 818 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 DRG2P55039 364 aaKnown RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 BNC1Q01954 994 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 EGR4Q05215 589 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 DDR1Q08345 913 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 TRAF3Q13114 568 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 CDONQ4KMG0 1287 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 XKR9Q5GH70 373 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 GKAP1Q5VSY0 366 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 SIGIRRQ6IA17 410 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 PDXDC1Q6P996 788 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 TMEM154Q6P9G4 183 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 SLC36A4Q6YBV0 504 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 TAOK1Q7L7X3 1001 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 CLIP4Q8N3C7 705 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 TTC39CQ8N584 583 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 RND1Q92730 232 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 IGSF8Q969P0 613 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 PHF21BQ96EK2 531 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 RRNAD1Q96FB5 475 aaKnown RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 ZNF479Q96JC4 524 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 ZPBPQ9BS86 351 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 PCGF1Q9BSM1 259 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 KCNN2Q9H2S1 579 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 OCIAD1Q9NX40 245 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 MAP3K20Q9NYL2 800 aaKnown RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 WNT16Q9UBV4 365 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 TTC7AQ9ULT0 858 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-211ENST00000476215 MTMR6Q9Y217 621 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 SNX9Q9Y5X1 595 aa4.99□□□□□ -1.61
PTCD3-211ENST00000476215 IGLV5-52A0A0A0MRZ9 124 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 A0A0U1RQJ8 604 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 C1orf226A1L170 272 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 LACTBL1A8MY62 500 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 PTGES3LE9PB15 166 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 SSTR2P30874 369 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 RAD23BP54727 409 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 GALCP54803 685 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 PRAMEP78395 509 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 DHX34Q14147 1143 aaKnown RBP4.98□□□□□ -1.61
PTCD3-211ENST00000476215 CRYMQ14894 314 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 NAB2Q15742 525 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 ZSCAN23Q3MJ62 389 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 AMZ1Q400G9 498 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 SARM1Q6SZW1 724 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 DLK2Q6UY11 383 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 GLDNQ6ZMI3 551 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-211ENST00000476215 DPPA4Q7L190 304 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 SGCDQ92629 289 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 MTBPQ96DY7 904 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 PPP1R13BQ96KQ4 1090 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 ACOX2Q99424 681 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 SH3GL2Q99962 352 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 PDZD7Q9H5P4 517 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 C17orf75Q9HAS0 396 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 NOX4Q9NPH5 578 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 HAUS2Q9NVX0 235 aa4.98□□□□□ -1.61
PTCD3-211ENST00000476215 FRMD3A2A2Y4 597 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 CPED1A4D0V7 1026 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 BTBD18B2RXH4 712 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 SOCS6O14544 535 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 HCRTR2O43614 444 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 TM4SF1P30408 202 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 HADHAP40939 763 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 CLNS1AP54105 237 aaKnown RBP4.97□□□□□ -1.61
PTCD3-211ENST00000476215 LTBQ06643 244 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 CTF1Q16619 201 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 PAPPA-AS1Q5QFB9 102 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 FAM69BQ5VUD6 431 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 FAM205BPQ63HN1 556 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 WDR73Q6P4I2 378 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 MEPCEQ7L2J0 689 aaKnown RBP4.97□□□□□ -1.61
PTCD3-211ENST00000476215 FOXRED2Q8IWF2 684 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 PGBD5Q8N414 524 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 CSF3RQ99062 836 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 NCAPGQ9BPX3 1015 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 SYNCQ9H7C4 482 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 TINAGQ9UJW2 476 aa4.97□□□□□ -1.61
PTCD3-211ENST00000476215 R3HDM2Q9Y2K5 976 aaKnown RBP4.97□□□□□ -1.61
PTCD3-211ENST00000476215 RB1CC1Q8TDY2 1594 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 CLEC18AA5D8T8 446 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 A6NCN8 305 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 SCAMP1O15126 338 aa4.96□□□□□ -1.62
PTCD3-211ENST00000476215 PLRG1O43660 514 aaKnown RBP4.96□□□□□ -1.62
PTCD3-211ENST00000476215 JRKO75564 520 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms