RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, human

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-215	ENST00000474539	FAM3C	Q92520	227 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	C19orf60	Q96EN9	201 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	WDR92	Q96MX6	357 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	SNRNP25	Q9BV90	132 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ADAMTS10	Q9H324	1103 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ETNK2	Q9NVF9	386 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	IMPAD1	Q9NX62	359 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	MIOS	Q9NXC5	875 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ANAPC2	Q9UJX6	822 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	NDUFAF1	Q9Y375	327 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	RAI2	Q9Y5P3	530 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ACOT7	O00154	380 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	EIF3F	O00303	357 aa	Predicted RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	DLX3	O60479	287 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	PEX10	O60683	326 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	BCAS2	O75934	225 aa	Predicted RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	NUDT14	O95848	222 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ALB	P02768	609 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	EDN1	P05305	212 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	DCTN2	Q13561	401 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	DDX39B	Q13838	428 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	SLC14A2	Q15849	920 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ZNF470	Q6ECI4	717 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	SULT1C3	Q6IMI6	304 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	C15orf39	Q6ZRI6	1047 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	SNX20	Q7Z614	316 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	TICAM1	Q8IUC6	712 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ZBTB2	Q8N680	514 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	SIDT2	Q8NBJ9	832 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	KIAA0895	Q8NCT3	520 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	FBXO36	Q8NEA4	188 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	OR2AP1	Q8NGE2	309 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	OR2T3	Q8NH03	318 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	CYP2W1	Q8TAV3	490 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	KAT2B	Q92831	832 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	NELL1	Q92832	810 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	ARMC5	Q96C12	935 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	THAP11	Q96EK4	314 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	OLFM3	Q96PB7	478 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	IP6K3	Q96PC2	410 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	TMEM209	Q96SK2	561 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	SLC25A23	Q9BV35	468 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	MRPL46	Q9H2W6	279 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	MANSC1	Q9H8J5	431 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	MS4A12	Q9NXJ0	267 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	FTSJ1	Q9UET6	329 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	FBXW11	Q9UKB1	542 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	COQ4	Q9Y3A0	265 aa		4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	COPG1	Q9Y678	874 aa	Known RBP	4.62	□□□□□ -1.67
CCNL1-215	ENST00000474539	PKD1L3	Q7Z443	1732 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	CCDC162P	A2VCL2	907 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	OR2AG2	A6NM03	316 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539		H0YJX3	145 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	DDX3Y	O15523	660 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	EPO	P01588	193 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	CYP11A1	P05108	521 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	SYN1	P17600	705 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ME2	P23368	584 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	CCKBR	P32239	447 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	UGT1A5	P35504	534 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	EIF2D	P41214	584 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MLLT3	P42568	568 aa	Predicted RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	RRAD	P55042	308 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	PRR5	P85299	388 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ST3GAL1	Q11201	340 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MAMLD1	Q13495	774 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	RUNX3	Q13761	415 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	CCL14	Q16627	93 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	INO80D	Q53TQ3	878 aa	Predicted RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	TCTE1	Q5JU00	501 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MPP7	Q5T2T1	576 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	C12orf40	Q86WS4	652 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	RASGRP3	Q8IV61	690 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MIER2	Q8N344	545 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	PIK3C3	Q8NEB9	887 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	HM13	Q8TCT9	377 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	HMGB4	Q8WW32	186 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MOAP1	Q96BY2	351 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ZBTB45	Q96K62	511 aa	Predicted RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	OLFM1	Q99784	485 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	CLSTN3	Q9BQT9	956 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	LRMDA	Q9H2I8	198 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	LYAR	Q9NX58	379 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	RIPK3	Q9Y572	518 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	OAS3	Q9Y6K5	1087 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	PRORSD1P	A6NEY8	169 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MYO1C	O00159	1063 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	BTN3A1	O00481	513 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	AP3D1	O14617	1153 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	TNFRSF10B	O14763	440 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	AXIN1	O15169	862 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	SLC16A5	O15375	505 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	GJB5	O95377	273 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	LBP	P18428	481 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	KCNA5	P22460	613 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	EEF1D	P29692	281 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms