RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CLEC4FQ8N1N0 589 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SRFBP1Q8NEF9 429 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ADAMTS16Q8TE57 1224 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PIGKQ92643 395 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC5A5Q92911 643 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 BADQ92934 168 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ZNF274Q96GC6 653 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ANKRD36BP1Q96IX9 119 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 GAL3ST4Q96RP7 486 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PTPN18Q99952 460 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 EFHD1Q9BUP0 239 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 GRIP2Q9C0E4 1043 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 FAM192AQ9GZU8 254 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 LHX5Q9H2C1 402 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 OR51V1Q9H2C8 321 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 LRMDAQ9H2I8 198 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 TDRD3Q9H7E2 651 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PHAXQ9H814 394 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 MBIPQ9NS73 344 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 RBM12Q9NTZ6 932 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ZDHHC18Q9NUE0 388 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PSMC3IPQ9P2W1 217 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 VPS51Q9UID3 782 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SPATA2Q9UM82 520 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 AP3M1Q9Y2T2 418 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ABCA12Q86UK0 2595 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 A0A1B0GTL3 188 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 A0A1W2PQ67 120 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 FIGNL2A6NMB9 653 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 B8ZZF3 427 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 H0YJX3 145 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 EML1O00423 815 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 NDUFA2O43678 99 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 SUPT3HO75486 399 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PDE5AO76074 875 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TGM6O95932 706 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CRYGCP07315 174 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CAPN1P07384 714 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 MLNP12872 115 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 HNRNPA2B1P22626 353 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PTPN3P26045 913 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 AFMP43652 599 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 RAP1GDS1P52306 607 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 SUCLG1P53597 346 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 COPB1P53618 953 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 HNRNPKP61978 463 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TBCCQ15814 346 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 GRIK4Q16099 956 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 AOC3Q16853 763 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 WHAMMP3Q1A5X7 153 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 SKIDA1Q1XH10 827 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TMEM119Q4V9L6 283 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 STRIP1Q5VSL9 837 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PLA2G4FQ68DD2 849 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 HEPHL1Q6MZM0 1159 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 KIAA1841Q6NSI8 718 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CNKSR3Q6P9H4 555 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 KCNT2Q6UVM3 1135 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 DPP8Q6V1X1 898 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CCDC50Q8IVM0 306 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PM20D2Q8IYS1 436 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ULK2Q8IYT8 1036 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ANKRD13CQ8N6S4 541 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ZNF781Q8N8C0 355 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 FSIP1Q8NA03 581 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 OR14C36Q8NHC7 312 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CPT1CQ8TCG5 803 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ABHD1Q96SE0 405 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CCDC28BQ9BUN5 200 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PBX4Q9BYU1 374 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TMEM245Q9H330 911 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CUEDC2Q9H467 287 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 DHX33Q9H6R0 707 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 INIPQ9NRY2 104 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CCM2LQ9NUG4 571 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TMEM140Q9NV12 185 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ANAPC2Q9UJX6 822 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TSC22D4Q9Y3Q8 395 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PCDHA3Q9Y5H8 950 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 BACE2Q9Y5Z0 518 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 DDX60LQ5H9U9 1706 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 POLR2AP24928 1970 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 VWA3AA6NCI4 1184 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 SMCO2A6NFE2 343 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PGRMC1O00264 195 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 NRG2O14511 850 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 C2CD2LO14523 706 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 SMAD9O15198 467 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 NKRFO15226 690 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 LRRTM2O43300 516 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ENTPD3O75355 529 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TRIM3O75382 744 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 APOA1P02647 267 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CPT2P23786 658 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ALDH3B1P43353 468 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 LEPRP48357 1165 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CLCN5P51795 746 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 FCGRTP55899 365 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms