RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 AGAP5A6NIR3 686 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 NPIPB13A6NJU9 1138 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 SOCS6O14544 535 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 HNRNPDLO14979 420 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 RASA4O43374 803 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 HNRNPRO43390 633 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TSPAN6O43657 245 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 NDUFS7O75251 213 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 NDUFB4O95168 129 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 IL1AP01583 271 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 S100BP04271 92 aaPredicted RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 EDN1P05305 212 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 ERVK-10P10266 1014 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TYMPP19971 482 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 CENPAP49450 140 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 CDK7P50613 346 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 HDAC4P56524 1084 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TUBB2AQ13885 445 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TMEM187Q14656 261 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 EFNB3Q15768 340 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 SIRPB2Q5JXA9 342 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 ZNF343Q6P1L6 599 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 WDR73Q6P4I2 378 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 C14orf80Q86SX3 495 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TMEM219Q86XT9 240 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 ODF3L1Q8IXM7 274 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 ANKRD13AQ8IZ07 590 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 DSELQ8IZU8 1212 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 DDHD1Q8NEL9 900 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 PPHLN1Q8NEY8 458 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 SLC2A12Q8TD20 617 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 HMGB4Q8WW32 186 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 PPM1EQ8WY54 764 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TIFAQ96CG3 184 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 PIGSQ96S52 555 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 IWS1Q96ST2 819 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 MECRQ9BV79 373 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TUBB2BQ9BVA1 445 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 CSTL1Q9H114 145 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 CERS4Q9HA82 394 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 TM7SF3Q9NS93 570 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 INTS10Q9NVR2 710 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 PCDHA10Q9Y5I2 948 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 DHX29Q7Z478 1369 aaKnown RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 PIK3C2GO75747 1445 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 NOS1P29475 1434 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 PTPRMP28827 1452 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 ERVK-7P63135 1459 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 ADAMTSL3P82987 1691 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 USP54Q70EL1 1684 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.8□□□□□ -2.12
CCDC39-203ENST00000473854 STRCP1A6NGW2 1772 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 LTN1O94822 1766 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 RGPD2P0DJD1 1756 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 EP400Q96L91 3159 aa1.8□□□□□ -2.12
CCDC39-203ENST00000473854 GOLGB1Q14789 3259 aaKnown RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 IGLV3-10A0A075B6K4 115 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 GOLGA6L9A6NEM1 432 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 EFCAB8A8MWE9 144 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 PPM1GO15355 546 aaPredicted RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 PLRG1O43660 514 aaKnown RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 WDR1O75083 606 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 MTA2O94776 668 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 CBX6O95503 412 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 HSPA5P11021 654 aaKnown RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 NPPBP16860 134 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 PRIM2P49643 509 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 CASP5P51878 434 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 SEC61BP60468 96 aaKnown RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 TBX2Q13207 712 aaPredicted RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 FAM53AQ6NSI3 398 aaPredicted RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 MON1AQ86VX9 555 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 BRSK2Q8IWQ3 736 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 C11orf53Q8IXP5 236 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 RNF113BQ8IZP6 322 aaKnown RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 AFAP1Q8N556 730 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 RASSF8Q8NHQ8 419 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 TTC8Q8TAM2 541 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 ZNRF4Q8WWF5 429 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 THAP4Q8WY91 577 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 JDP2Q8WYK2 163 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 CPT1BQ92523 772 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 RSC1A1Q92681 617 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 TTC17Q96AE7 1141 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 AGAP3Q96P47 875 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 KXD1Q9BQD3 176 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 SYT11Q9BT88 431 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 TMEM30AQ9NV96 361 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 PCDHGB5Q9Y5G0 923 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 SPAG9O60271 1321 aaKnown RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 DISP3Q9P2K9 1392 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 CPS1P31327 1500 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 ADGRB2O60241 1585 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 CRYBG1Q9Y4K1 1723 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 N4BP2Q86UW6 1770 aaPredicted RBP1.79□□□□□ -2.12
CCDC39-203ENST00000473854 RGPD5Q99666 1765 aa1.79□□□□□ -2.12
CCDC39-203ENST00000473854 SMCHD1A6NHR9 2005 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 ZNF646O15015 1829 aaPredicted RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 PIK3C2AO00443 1686 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 ALKQ9UM73 1620 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms