RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 BPIFA1Q9NP55 256 aa4.31□□□□□ -1.72
RAB5A-207ENST00000473608 CCDC177Q9NQR7 707 aaPredicted RBP4.31□□□□□ -1.72
RAB5A-207ENST00000473608 THSD1Q9NS62 852 aa4.31□□□□□ -1.72
RAB5A-207ENST00000473608 ANKRD10Q9NXR5 420 aa4.31□□□□□ -1.72
RAB5A-207ENST00000473608 ADAMDEC1O15204 470 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 TLX3O43711 291 aaPredicted RBP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 NDUFB8O95169 186 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 MMP2P08253 660 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 TMEM191BP0C7N4 346 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 CHRNB1P11230 501 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 SAT1P21673 171 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 TBXAS1P24557 533 aaPredicted RBP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 RFC1P35251 1148 aaPredicted RBP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 PIK3CAP42336 1068 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 TMPRSS3P57727 454 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 ACSM2AQ08AH3 577 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 LPIN1Q14693 890 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 KRT24Q2M2I5 525 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 ZSCAN23Q3MJ62 389 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 LEXMQ3ZCV2 418 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 C6orf141Q5SZD1 244 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 ERMARDQ5T6L9 678 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 ACSM2BQ68CK6 577 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 COLCA1Q6ZS62 124 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 HAPLN4Q86UW8 402 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 CCDC13Q8IYE1 715 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 MMP21Q8N119 569 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 PARP16Q8N5Y8 322 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 ZBTB2Q8N680 514 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 HORMAD2Q8N7B1 307 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 SLC44A5Q8NCS7 719 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 HUS1BQ8NHY5 278 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 CCDC34Q96HJ3 373 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 SLC41A2Q96JW4 573 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 CNDP2Q96KP4 475 aaKnown RBP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 SLITRK1Q96PX8 696 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 GCNAQ96QF7 691 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 FAM110AQ9BQ89 295 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 TMEM47Q9BQJ4 181 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 WDR83Q9BRX9 315 aaKnown RBP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 APOL6Q9BWW8 343 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 B3GNT4Q9C0J1 378 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 LHPPQ9H008 270 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 CDT1Q9H211 546 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 KLHL31Q9H511 634 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 ZHX1Q9UKY1 873 aaPredicted RBP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 NOL7Q9UMY1 257 aaKnown RBP4.3□□□□□ -1.72
RAB5A-207ENST00000473608 CEPT1Q9Y6K0 416 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 MAU2Q9Y6X3 613 aa4.3□□□□□ -1.72
RAB5A-207ENST00000473608 TMEM272A0A1B0GTI8 110 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 MYMKA6NI61 221 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 H3BNX3 289 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PRPF4O43172 522 aaKnown RBP eCLIP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 MITFO75030 526 aaPredicted RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 ATG13O75143 517 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 TBX10O75333 385 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 RPN1P04843 607 aaKnown RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 TMEM11P17152 192 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 ACADLP28330 430 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PNLIPRP2P54317 469 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 RRP1P56182 461 aaKnown RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 UBXN2AP68543 259 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 GAD2Q05329 585 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 FAM27E3Q08E93 113 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 AIMP1Q12904 312 aaKnown RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 NAE1Q13564 534 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PSMD6Q15008 389 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 INPP5JQ15735 1006 aaPredicted RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 ADIPOQQ15848 244 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 C2orf68Q2NKX9 166 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PIK3CD-AS1Q5SR53 167 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 LRIF1Q5T3J3 769 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PLEKHA7Q6IQ23 1121 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 HMBOX1Q6NT76 420 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 USP43Q70EL4 1123 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 TRILQ7L0X0 811 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PLPPR4Q7Z2D5 763 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 TSPAN33Q86UF1 283 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 AACSQ86V21 672 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 FAM217AQ8IXS0 508 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 RNF168Q8IYW5 571 aaPredicted RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 IGSF8Q969P0 613 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 RRNAD1Q96FB5 475 aaKnown RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PGAP3Q96FM1 320 aaPredicted RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PAFAH2Q99487 392 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 SEPT5Q99719 369 aaPredicted RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 IFIH1Q9BYX4 1025 aaKnown RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 NPFFR1Q9GZQ6 430 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 SIL1Q9H173 461 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 HRH4Q9H3N8 390 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 MAP6D1Q9H9H5 199 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 DECR2Q9NUI1 292 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 POT1Q9NUX5 634 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PAG1Q9NWQ8 432 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 C5AR2Q9P296 337 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 CPSF2Q9P2I0 782 aaKnown RBP4.29□□□□□ -1.72
RAB5A-207ENST00000473608 PCDHA12Q9UN75 941 aa4.29□□□□□ -1.72
RAB5A-207ENST00000473608 SQORQ9Y6N5 450 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms