RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CFAP69A5D8W1 941 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ANKRD62A6NC57 917 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 TMEM202A6NGA9 273 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 C2CD4BA6NLJ0 364 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 F8VZ95 297 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 INSIG1O15503 277 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 RECQL5O94762 991 aaPredicted RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 NTRK1P04629 796 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ELFN1P0C7U0 828 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 UCHL3P15374 230 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 MMP8P22894 467 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 OAS2P29728 719 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ETV5P41161 510 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 PTPN9P43378 593 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 NSFP46459 744 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ZNF165P49910 485 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 HDAC4P56524 1084 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 WDR4P57081 412 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 KIAA1024LP59773 190 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 POLR2LP62875 67 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 IRX1P78414 480 aaPredicted RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SRSF1Q07955 248 aaKnown RBP eCLIP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ILF3Q12906 894 aaKnown RBP eCLIP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 KCNAB2Q13303 367 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SERINC3Q13530 473 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 PEX6Q13608 980 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 HLTFQ14527 1009 aaKnown RBP eCLIP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 CLCA4Q14CN2 919 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 AGERQ15109 404 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 CAMK4Q16566 473 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 STX1AQ16623 288 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 RAB6CQ53S08 254 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 HSP90AA4PQ58FG1 418 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 KLHDC7AQ5VTJ3 777 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SPECC1LQ69YQ0 1117 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 OGFOD3Q6PK18 319 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 RBM43Q6ZSC3 357 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 HDXQ7Z353 690 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 PTRH1Q86Y79 214 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 CCDC50Q8IVM0 306 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SLITRK4Q8IW52 837 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 C17orf53Q8N3J3 647 aaPredicted RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 PLA2G15Q8NCC3 412 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 RCBTB1Q8NDN9 531 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 GPBAR1Q8TDU6 330 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 EPS8L1Q8TE68 723 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 OR1E3Q8WZA6 343 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 NTAN1Q96AB6 310 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 FUBP1Q96AE4 644 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 VOPP1Q96AW1 172 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 CDK15Q96Q40 435 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 TAAR9Q96RI9 348 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 TUBGCP5Q96RT8 1024 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 C11orf70Q9BRQ4 267 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SELENOOQ9BVL4 669 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 STK33Q9BYT3 514 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 B3GNT4Q9C0J1 378 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 RAB6CQ9H0N0 254 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 TMEM168Q9H0V1 697 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ADNPQ9H2P0 1102 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 WDR26Q9H7D7 661 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ATP13A3Q9H7F0 1226 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SUDS3Q9H7L9 328 aaPredicted RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 FGF22Q9HCT0 170 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ANO10Q9NW15 660 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ATP8A1Q9Y2Q0 1164 aa6.94□□□□□ -1.3
CKS1B-205ENST00000473344 ARID1BQ8NFD5 2236 aaPredicted RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 COL27A1Q8IZC6 1860 aaPredicted RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
CKS1B-205ENST00000473344 TSPAN11A1L157 253 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 RASA4BC9J798 803 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 TNFRSF10CO14798 259 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 HGSO14964 777 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 FGF10O15520 208 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 TEX33O43247 280 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 RASA4O43374 803 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 CBFA2T2O43439 604 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 GADD45BO75293 160 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 PALMO75781 387 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 GFPT2O94808 682 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 PRKCGP05129 697 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 CCL4P13236 92 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 CCNB1P14635 433 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 WT1P19544 449 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 GPD1P21695 349 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 RFC1P35251 1148 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 MMP12P39900 470 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 STAT1P42224 750 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 CCR10P46092 362 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 LMAN1P49257 510 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 AIF1P55008 147 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 POLE2P56282 527 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 OR1D5P58170 312 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
CKS1B-205ENST00000473344 CDR2Q01850 454 aa6.93□□□□□ -1.3
CKS1B-205ENST00000473344 BCL2L1Q07817 233 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms