RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ARRDC1-AS1Q9H2J1 176 aa9.12□□□□□ -0.95
SMC4-214ENST00000472991 EBF2Q9HAK2 575 aa9.12□□□□□ -0.95
SMC4-214ENST00000472991 VPS45Q9NRW7 570 aa9.12□□□□□ -0.95
SMC4-214ENST00000472991 HOMER3Q9NSC5 361 aa9.12□□□□□ -0.95
SMC4-214ENST00000472991 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
SMC4-214ENST00000472991 COQ6Q9Y2Z9 468 aa9.12□□□□□ -0.95
SMC4-214ENST00000472991 SLCO1B1Q9Y6L6 691 aa9.12□□□□□ -0.95
SMC4-214ENST00000472991 CABIN1Q9Y6J0 2220 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ZFHX2Q9C0A1 2572 aaPredicted RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 A0A0U1RQS6 177 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 A0A1W2PPC4 97 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 IGLON5A6NGN9 336 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 CAPN8A6NHC0 703 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 NPIPB15A6NHN6 443 aaPredicted RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 PDE2AO00408 941 aaPredicted RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 CDK2AP1O14519 115 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 SLC31A1O15431 190 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 LATO43561 262 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 MMP20O60882 483 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ANXA9O76027 345 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 METTL18O95568 372 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 NDST3O95803 873 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ELFN1P0C7U0 828 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ZSCAN5DPP0CG00 497 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 CYP2A6P11509 494 aaPredicted RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 BMP4P12644 408 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 C6P13671 934 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 LHCGRP22888 699 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 NFKBIAP25963 317 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 CD27P26842 260 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 STIP1P31948 543 aaKnown RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 VIPR1P32241 457 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ACTN2P35609 894 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 COILP38432 576 aaPredicted RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 MPLP40238 635 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 GRIA4P48058 902 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 LIG3P49916 1009 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 RPL26P61254 145 aaKnown RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 RPS21P63220 83 aaKnown RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 OLIG2Q13516 323 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 FGL2Q14314 439 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 PRPSAP1Q14558 356 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 CNGA3Q16281 694 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ZNF284Q2VY69 593 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 SETMARQ53H47 684 aaPredicted RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 CCDC137Q6PK04 289 aaKnown RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 USP45Q70EL2 814 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ASCL5Q7RTU5 278 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 GSTA5Q7RTV2 222 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 TSPAN33Q86UF1 283 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 SYT12Q8IV01 421 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 NDUFAF2Q8N183 169 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 DNASE2BQ8WZ79 361 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 SLC6A18Q96N87 628 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 HINFPQ9BQA5 517 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ORAI3Q9BRQ5 295 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 FICDQ9BVA6 458 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 DDX47Q9H0S4 455 aaKnown RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 FZD3Q9NPG1 666 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 TMEM74BQ9NUR3 256 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 PILRBQ9UKJ0 227 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 TPX2Q9ULW0 747 aaKnown RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 RPL26L1Q9UNX3 145 aaKnown RBP9.11□□□□□ -0.95
SMC4-214ENST00000472991 PPIL1Q9Y3C6 166 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 PCDHGA5Q9Y5G8 931 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 PIKFYVEQ9Y2I7 2098 aa9.11□□□□□ -0.95
SMC4-214ENST00000472991 ZNF292O60281 2723 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 GOLGA6CA6NDK9 693 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 GOLGA6BA6NDN3 693 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 PATE3B3GLJ2 98 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 ANKRD66B4E2M5 251 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 LZTS3O60299 673 aaPredicted RBP9.1□□□□□ -0.95
SMC4-214ENST00000472991 USP12O75317 370 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 TM7SF2O76062 418 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 HEXIM1O94992 359 aaKnown RBP9.1□□□□□ -0.95
SMC4-214ENST00000472991 SLC4A1P02730 911 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 ITGB2P05107 769 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 RETP07949 1114 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 ATXN1LP0C7T5 689 aaKnown RBP9.1□□□□□ -0.95
SMC4-214ENST00000472991 PIRTP0C851 137 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 GOLGA6DP0CG33 693 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 RPL22P35268 128 aaKnown RBP9.1□□□□□ -0.95
SMC4-214ENST00000472991 HNF1BP35680 557 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 FDFT1P37268 417 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 PAFAH1B1P43034 410 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 CHRNA4P43681 627 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 TNNT3P45378 269 aaPredicted RBP9.1□□□□□ -0.95
SMC4-214ENST00000472991 FNTAP49354 379 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 ARHGEF7Q14155 803 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 PARP6Q2NL67 630 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 PLA2G4EQ3MJ16 856 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 SIRPB2Q5JXA9 342 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 PEAR1Q5VY43 1037 aaPredicted RBP9.1□□□□□ -0.95
SMC4-214ENST00000472991 LRRC66Q68CR7 880 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 DENND2CQ68D51 928 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 NAPEPLDQ6IQ20 393 aa9.1□□□□□ -0.95
SMC4-214ENST00000472991 LAYNQ6UX15 382 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms