RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 FAXCQ5TGI0 409 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 TMC3Q7Z5M5 1100 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 LINC00523Q86TU6 105 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 OXR1Q8N573 874 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 MINDY1Q8N5J2 469 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 PDCD7Q8N8D1 485 aaKnown RBP20.76■□□□□ 0.91
TOP3A-204ENST00000472959 GLIS1Q8NBF1 620 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 NETO1Q8TDF5 533 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 GRK7Q8WTQ7 553 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 CDH19Q9H159 772 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 GAREM1Q9H706 876 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 DNAAF2Q9NVR5 837 aaKnown RBP20.76■□□□□ 0.91
TOP3A-204ENST00000472959 SHOC2Q9UQ13 582 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 SPO11Q9Y5K1 396 aa20.76■□□□□ 0.91
TOP3A-204ENST00000472959 PI4KAP42356 2102 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 ZNF292O60281 2723 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.75■□□□□ 0.91
TOP3A-204ENST00000472959 GOLGA8CPA6NN73 597 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 GDF9O60383 454 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 PCCBP05166 539 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 PYGLP06737 847 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 ZSCAN5DPP0CG00 497 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 TEAD1P28347 426 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 SPINT3P49223 89 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 SPARCL1Q14515 664 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 STPG1Q5TH74 334 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 PNCKQ6P2M8 343 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 PRUNE1Q86TP1 453 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 SPATS2Q86XZ4 545 aaKnown RBP20.75■□□□□ 0.91
TOP3A-204ENST00000472959 TAB3Q8N5C8 712 aaPredicted RBP20.75■□□□□ 0.91
TOP3A-204ENST00000472959 C16orf45Q96MC5 204 aaPredicted RBP20.75■□□□□ 0.91
TOP3A-204ENST00000472959 APOL2Q9BQE5 337 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 ABCG8Q9H221 673 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 RALGAPA1Q6GYQ0 2036 aa20.75■□□□□ 0.91
TOP3A-204ENST00000472959 WDR87Q6ZQQ6 2873 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 SPTY2D1-AS1A0A0U1RR47 76 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 USP12O75317 370 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 SUN1O94901 812 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 GAS8O95995 478 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 HOXC4P09017 264 aaPredicted RBP20.74■□□□□ 0.91
TOP3A-204ENST00000472959 ZNF883P0CG24 379 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 TSHRP16473 764 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 SDHBP21912 280 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 HMGCLP35914 325 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 TRIM23P36406 574 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 LMAN1P49257 510 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 THOP1P52888 689 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 DENND5AQ6IQ26 1287 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 SLC22A18ASQ8N1D0 253 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 PLA2G15Q8NCC3 412 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 BLOC1S5Q8TDH9 187 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 AP2M1Q96CW1 435 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 EID2BQ96D98 161 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 ELF4Q99607 663 aaPredicted RBP20.74■□□□□ 0.91
TOP3A-204ENST00000472959 APOOQ9BUR5 198 aa20.74■□□□□ 0.91
TOP3A-204ENST00000472959 PLXNA2O75051 1894 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 C4orf47A7E2U8 309 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 YKT6O15498 198 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 KRT14P02533 472 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 HTR1BP28222 390 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 RXRGP48443 463 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 ARRB1P49407 418 aaPredicted RBP20.73■□□□□ 0.91
TOP3A-204ENST00000472959 SLC14A1Q13336 389 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 OLIG2Q13516 323 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 PDE1CQ14123 709 aaPredicted RBP20.73■□□□□ 0.91
TOP3A-204ENST00000472959 ZDHHC20Q5W0Z9 365 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 RFLNAQ6ZTI6 216 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 GLT6D1Q7Z4J2 308 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 TTC30BQ8N4P2 665 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 BRSK1Q8TDC3 778 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 RUNDC3BQ96NL0 473 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 FAM83DQ9H4H8 585 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 WDR26Q9H7D7 661 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 EIF2B3Q9NR50 452 aaKnown RBP20.73■□□□□ 0.91
TOP3A-204ENST00000472959 NFKBIL1Q9UBC1 381 aaPredicted RBP20.73■□□□□ 0.91
TOP3A-204ENST00000472959 CD84Q9UIB8 345 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 PCDH15Q96QU1 1955 aa20.73■□□□□ 0.91
TOP3A-204ENST00000472959 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-204ENST00000472959 A0A1B0GTQ1 180 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 CCDC188H7C350 402 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 KIF2AO00139 706 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-204ENST00000472959 CACNB4O00305 520 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-204ENST00000472959 PDE2AO00408 941 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-204ENST00000472959 AURKAO14965 403 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 PPFIA2O75334 1257 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 APRTP07741 180 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 DCDC1P59894 354 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 PDE1BQ01064 536 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 FZD2Q14332 565 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 TAF1AQ15573 450 aaPredicted RBP20.72■□□□□ 0.91
TOP3A-204ENST00000472959 MACC1Q6ZN28 852 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 PARGQ86W56 976 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 OR2I1PQ8NGU4 316 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 SLCO2A1Q92959 643 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 SCAMP4Q969E2 229 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 RIOK2Q9BVS4 552 aaKnown RBP20.72■□□□□ 0.91
TOP3A-204ENST00000472959 IL21RQ9HBE5 538 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 PCYOX1Q9UHG3 505 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 FNDC3AQ9Y2H6 1198 aaKnown RBP20.72■□□□□ 0.91
TOP3A-204ENST00000472959 NEU2Q9Y3R4 380 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms