RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 SERPING1P05155 500 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 CEACAM5P06731 702 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 CTPS1P17812 591 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 GNPDA1P46926 289 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 MAZP56270 477 aaKnown RBP19.73■□□□□ 0.75
COL9A3-210ENST00000472880 ITKQ08881 620 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 BIRC2Q13490 618 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 PHF19Q5T6S3 580 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 Q6ZVL8 140 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 TSPAN33Q86UF1 283 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 LRRC49Q8IUZ0 686 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 NDUFAF2Q8N183 169 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 ZDHHC1Q8WTX9 485 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 TTC9Q92623 222 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 MCCC1Q96RQ3 725 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-210ENST00000472880 CMKLR1Q99788 373 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 TRNAU1APQ9NX07 287 aaKnown RBP19.73■□□□□ 0.75
COL9A3-210ENST00000472880 ACSL6Q9UKU0 697 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 SUFUQ9UMX1 484 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 MGAQ8IWI9 3026 aa19.73■□□□□ 0.75
COL9A3-210ENST00000472880 RHPN2P1A8MT19 583 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 AGRPO00253 132 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 MFSD11O43934 449 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 CYP1A2P05177 515 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 PTMSP20962 102 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 TEAD1P28347 426 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 FANCCQ00597 558 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 ZFP36L1Q07352 338 aaKnown RBP19.72■□□□□ 0.75
COL9A3-210ENST00000472880 NFKBIBQ15653 356 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 HADHQ16836 314 aaKnown RBP19.72■□□□□ 0.75
COL9A3-210ENST00000472880 KIAA1614Q5VZ46 1190 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 DOK6Q6PKX4 331 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 SLC30A9Q6PML9 568 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 SEMA3CQ99985 751 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 FUCA2Q9BTY2 467 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 POLR1EQ9GZS1 481 aaKnown RBP19.72■□□□□ 0.75
COL9A3-210ENST00000472880 SPATS2LQ9NUQ6 558 aaKnown RBP19.72■□□□□ 0.75
COL9A3-210ENST00000472880 TAAR2Q9P1P5 351 aa19.72■□□□□ 0.75
COL9A3-210ENST00000472880 MYO1FO00160 1098 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 NVLO15381 856 aaKnown RBP19.71■□□□□ 0.75
COL9A3-210ENST00000472880 ZW10O43264 779 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 PLA2G2AP14555 144 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 ITIH1P19827 911 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 AK4P27144 223 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-210ENST00000472880 GJC1P36383 396 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 GPR1P46091 355 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 ZBED6P86452 979 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 MMRN1Q13201 1228 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 PEX6Q13608 980 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 LY6DQ14210 128 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 PTPRRQ15256 657 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 AMZ1Q400G9 498 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 CCDC122Q5T0U0 273 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 NRROSQ86YC3 692 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 SLITRK4Q8IW52 837 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 CBARPQ8N350 705 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-210ENST00000472880 TEX26Q8N6G2 289 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 CPLX3Q8WVH0 158 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 PIH1D2Q8WWB5 315 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 IQCDQ96DY2 449 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 CDH19Q9H159 772 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 CBX8Q9HC52 389 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 HAUS2Q9NVX0 235 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 AKAP7Q9P0M2 348 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-210ENST00000472880 PPIL1Q9Y3C6 166 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 SCN8AQ9UQD0 1980 aa19.71■□□□□ 0.75
COL9A3-210ENST00000472880 A0A087X0T9 212 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 CPNE6O95741 557 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 FUCA1P04066 466 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 FGF1P05230 155 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 IVLP07476 585 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 CD48P09326 243 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 FAM228BP0C875 321 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 LIPCP11150 499 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 ALDH4A1P30038 563 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 PBX1P40424 430 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 GARSP41250 739 aaKnown RBP19.7■□□□□ 0.74
COL9A3-210ENST00000472880 EPHB1P54762 984 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 UBASH3AP57075 661 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 B4GALNT1Q00973 533 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 DPTQ07507 201 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 GALNT2Q10471 571 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 LRRC66Q68CR7 880 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 TIGD7Q6NT04 549 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-210ENST00000472880 ALKBH5Q6P6C2 394 aaKnown RBP19.7■□□□□ 0.74
COL9A3-210ENST00000472880 ZNF438Q7Z4V0 828 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 LUZP1Q86V48 1076 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 PIM3Q86V86 326 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 C17orf82Q86X59 251 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-210ENST00000472880 ZNF564Q8TBZ8 553 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-210ENST00000472880 AP2M1Q96CW1 435 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 RDH14Q9HBH5 336 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 CD84Q9UIB8 345 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 SLC17A4Q9Y2C5 497 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 TTLL3Q9Y4R7 772 aa19.7■□□□□ 0.74
COL9A3-210ENST00000472880 PRAMEF33A0A0G2JMD5 474 aa19.69■□□□□ 0.74
COL9A3-210ENST00000472880 SYCE3A1L190 88 aa19.69■□□□□ 0.74
COL9A3-210ENST00000472880 FZD6O60353 706 aa19.69■□□□□ 0.74
COL9A3-210ENST00000472880 PRAMEF10O60809 474 aa19.69■□□□□ 0.74
COL9A3-210ENST00000472880 ECEL1O95672 775 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms