RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 POP4O95707 220 aaKnown RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 LDOC1O95751 146 aaPredicted RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 JCHAINP01591 159 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 RBP3P10745 1247 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 BMP4P12644 408 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 CR2P20023 1033 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 MSX1P28360 303 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 ABL2P42684 1182 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 RXRGP48443 463 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 CSNK1DP48730 415 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 ACADVLP49748 655 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 SCNN1BP51168 640 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 EIF3EP60228 445 aaKnown RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 IFI35P80217 286 aaPredicted RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 XRCC4Q13426 336 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 STAT4Q14765 748 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 SETMARQ53H47 684 aaPredicted RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 SLC45A4Q5BKX6 768 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 GCNT7Q6ZNI0 430 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 ERN2Q76MJ5 926 aaKnown RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 PARS2Q7L3T8 475 aaKnown RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 HORMAD1Q86X24 394 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 CDKL3Q8IVW4 592 aaPredicted RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 SLC22A18ASQ8N1D0 253 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMC4-213ENST00000472282 TEX26Q8N6G2 289 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 CNTD1Q8N815 330 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 OR13H1Q8NG92 308 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 EDARADDQ8WWZ3 215 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 ATG4AQ8WYN0 398 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 SKA1Q96BD8 255 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 PPP1R16AQ96I34 528 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 LRIG1Q96JA1 1093 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 NSMCE3Q96MG7 304 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 KLHL32Q96NJ5 620 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 WDR24Q96S15 920 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 IL12RB2Q99665 862 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 POLR1EQ9GZS1 481 aaKnown RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 C10orf88Q9H8K7 445 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 ERVMER34-1Q9H9K5 563 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 DYRK4Q9NR20 520 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 RBM22Q9NW64 420 aaKnown RBP eCLIP9.19□□□□□ -0.945e-24■■■■■ 66.5
SMC4-213ENST00000472282 UCKL1Q9NWZ5 548 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 DMTF1Q9Y222 760 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 ITM2BQ9Y287 266 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 R3HDM2Q9Y2K5 976 aaKnown RBP9.19□□□□□ -0.94
SMC4-213ENST00000472282 ASPMQ8IZT6 3477 aa9.19□□□□□ -0.94
SMC4-213ENST00000472282 TRABD2BA6NFA1 517 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 TRIM38O00635 465 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 PCDH8O95206 1070 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 FGGP02679 453 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ITGB2P05107 769 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 THEGLP0DJG4 465 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 GIMD1P0DJR0 217 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ADRB3P13945 408 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ITIH2P19823 946 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ITGB7P26010 798 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 PTPN3P26045 913 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 RBL1P28749 1068 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 NEK3P51956 506 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 AP1S1P61966 158 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 DSC2Q02487 901 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ITKQ08881 620 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 NSUN2Q08J23 767 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMC4-213ENST00000472282 GRM3Q14832 879 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 SMAD1Q15797 465 aaKnown RBP9.18□□□□□ -0.94
SMC4-213ENST00000472282 ZNF805Q5CZA5 627 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ZNF542PQ5EBM4 170 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 LRRC73Q5JTD7 316 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 TPRG1LQ5T0D9 272 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ALG1LQ6GMV1 187 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 DARS2Q6PI48 645 aaKnown RBP9.18□□□□□ -0.94
SMC4-213ENST00000472282 FIGNL1Q6PIW4 674 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 GDPD4Q6W3E5 623 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 IQCHQ86VS3 1027 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 SLC25A45Q8N413 288 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 KLHDC7BQ96G42 594 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 BMFQ96LC9 184 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 AGAP3Q96P47 875 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 NUDCD1Q96RS6 583 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 TUBGCP5Q96RT8 1024 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 OSBPL9Q96SU4 736 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 SEMA3CQ99985 751 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 OSBPL1AQ9BXW6 950 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 HDAC8Q9BY41 377 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 CPEB1Q9BZB8 566 aaKnown RBP9.18□□□□□ -0.94
SMC4-213ENST00000472282 CEP295Q9C0D2 2601 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ATP13A3Q9H7F0 1226 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 HAUS2Q9NVX0 235 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 KLHL8Q9P2G9 620 aaPredicted RBP9.18□□□□□ -0.94
SMC4-213ENST00000472282 AMACRQ9UHK6 382 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 TPX2Q9ULW0 747 aaKnown RBP9.18□□□□□ -0.94
SMC4-213ENST00000472282 ZKSCAN5Q9Y2L8 839 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 FADS3Q9Y5Q0 445 aa9.18□□□□□ -0.94
SMC4-213ENST00000472282 ZNF106Q9H2Y7 1883 aaKnown RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 POM121BA6NF01 834 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 C16orf96A6NNT2 1141 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms