RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DMXL1Q9Y485 3027 aa15.27■□□□□ 0.03
SDC3-203ENST00000471567 TP53BP1Q12888 1972 aaPredicted RBP15.26■□□□□ 0.03
SDC3-203ENST00000471567 A0A0U1RQS6 177 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 F5H423 210 aaPredicted RBP15.26■□□□□ 0.03
SDC3-203ENST00000471567 CACNB4O00305 520 aaPredicted RBP15.26■□□□□ 0.03
SDC3-203ENST00000471567 PDE2AO00408 941 aaPredicted RBP15.26■□□□□ 0.03
SDC3-203ENST00000471567 CES2O00748 559 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 PSMD3O43242 534 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 SH3BP5O60239 455 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 CSF2P04141 144 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 ATP1A1P05023 1023 aaKnown RBP15.26■□□□□ 0.03
SDC3-203ENST00000471567 CEACAM1P13688 526 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 NME1P15531 152 aaKnown RBP15.26■□□□□ 0.03
SDC3-203ENST00000471567 KELP23276 732 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 ADRA1AP35348 466 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 SPINT3P49223 89 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 GDF10P55107 478 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 KIAA1024LP59773 190 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 HNRNPKP61978 463 aaKnown RBP eCLIP15.26■□□□□ 0.03
SDC3-203ENST00000471567 SIRPB2Q5JXA9 342 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 TPRG1LQ5T0D9 272 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 RANBP10Q6VN20 620 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 KDM7AQ6ZMT4 941 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 LYSMD3Q7Z3D4 306 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 DGLUCYQ7Z3D6 616 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 TMC3Q7Z5M5 1100 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 BTN2A2Q8WVV5 523 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 NAP1L3Q99457 506 aaPredicted RBP15.26■□□□□ 0.03
SDC3-203ENST00000471567 CDH19Q9H159 772 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 ABCG8Q9H221 673 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 RAD18Q9NS91 495 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 DNAJC28Q9NX36 388 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 HACD3Q9P035 362 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 SNX12Q9UMY4 172 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 ZNF711Q9Y462 761 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 OR1A2Q9Y585 309 aa15.26■□□□□ 0.03
SDC3-203ENST00000471567 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
SDC3-203ENST00000471567 GOLGA8CPA6NN73 597 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 H3BM21 787 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 KCNK5O95279 499 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 AGTP01019 485 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 ACTN2P35609 894 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 GRK6P43250 576 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 IL9RQ01113 521 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 BNIP3Q12983 259 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 EIF2B5Q13144 721 aaKnown RBP15.25■□□□□ 0.03
SDC3-203ENST00000471567 SNX1Q13596 522 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 KANSL1Q7Z3B3 1105 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 SLC25A41Q8N5S1 370 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 SETD7Q8WTS6 366 aaKnown RBP15.25■□□□□ 0.03
SDC3-203ENST00000471567 FUBP1Q96AE4 644 aaKnown RBP15.25■□□□□ 0.03
SDC3-203ENST00000471567 AP2M1Q96CW1 435 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 TBATAQ96M53 351 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 WDR92Q96MX6 357 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 OSBPL9Q96SU4 736 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 FICDQ9BVA6 458 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 TEX101Q9BY14 249 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 GPR63Q9BZJ6 419 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 FAM83DQ9H4H8 585 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 WDR26Q9H7D7 661 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 PHPT1Q9NRX4 125 aaPredicted RBP15.25■□□□□ 0.03
SDC3-203ENST00000471567 FEZ2Q9UHY8 353 aaPredicted RBP15.25■□□□□ 0.03
SDC3-203ENST00000471567 PCOLCE2Q9UKZ9 415 aa15.25■□□□□ 0.03
SDC3-203ENST00000471567 K7ESM1 405 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 TNFRSF10CO14798 259 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 CBFA2T3O75081 653 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 PIAS2O75928 621 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 METTL18O95568 372 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 PIRTP0C851 137 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 MYCLP1P12525 358 aaPredicted RBP15.24■□□□□ 0.03
SDC3-203ENST00000471567 TCP1P17987 556 aaKnown RBP15.24■□□□□ 0.03
SDC3-203ENST00000471567 DGKAP23743 735 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 FDFT1P37268 417 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 CHRNA4P43681 627 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 GPR1P46091 355 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 BLKP51451 505 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 NOVA1P51513 510 aaKnown RBP15.24■□□□□ 0.03
SDC3-203ENST00000471567 DCDC1P59894 354 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 GNG11P61952 73 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 PPARDQ03181 441 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 KCTD11Q693B1 232 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 RAET1GQ6H3X3 334 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 ADAMTSL4Q6UY14 1074 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 C4orf22Q6V702 233 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 RFLNAQ6ZTI6 216 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 GATAD2AQ86YP4 633 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 PELI3Q8N2H9 469 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 PRELID2Q8N945 189 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 DEFB124Q8NES8 71 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 ACTRT1Q8TDG2 376 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 RHBDD1Q8TEB9 315 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 SCAMP4Q969E2 229 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 EID2BQ96D98 161 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 CDC6Q99741 560 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 RIOK2Q9BVS4 552 aaKnown RBP15.24■□□□□ 0.03
SDC3-203ENST00000471567 ARNT2Q9HBZ2 717 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 NFKBIL1Q9UBC1 381 aaPredicted RBP15.24■□□□□ 0.03
SDC3-203ENST00000471567 CD84Q9UIB8 345 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 SHOC2Q9UQ13 582 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 SPO11Q9Y5K1 396 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms