RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 BCL2L1Q07817 233 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 PEX6Q13608 980 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 MEA1Q16626 185 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 KYNUQ16719 465 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 CLPPQ16740 277 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ACBD5Q5T8D3 534 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 FAM72AQ5TYM5 149 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 FAM72DQ6L9T8 149 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 SCYL2Q6P3W7 929 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 BRAT1Q6PJG6 821 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 LIPIQ6XZB0 460 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ENOSF1Q7L5Y1 443 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF438Q7Z4V0 828 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 TRIM74Q86UV6 250 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 FAM72BQ86X60 149 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ZSWIM9Q86XI8 627 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 BMPERQ8N8U9 685 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 TMEM35BQ8NCS4 154 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 SLC37A2Q8TED4 501 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 NELFBQ8WX92 580 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 C19orf60Q96EN9 201 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 CEP63Q96MT8 703 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 TGM7Q96PF1 710 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 OR2M4Q96R27 311 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 OR6C1Q96RD1 312 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ATP13A3Q9H7F0 1226 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 GDPD2Q9HCC8 539 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 PPARGC1AQ9UBK2 798 aaKnown RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 LHX3Q9UBR4 397 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 UBA2Q9UBT2 640 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF212Q9UDV6 495 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 CD84Q9UIB8 345 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 G3BP2Q9UN86 482 aaKnown RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 PRKAB1Q9Y478 270 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 TTC24A2A3L6 582 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 GOLGA6L4A6NEF3 574 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 RASA4BC9J798 803 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF185O15231 689 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 RASA4O43374 803 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 NDUFA10O95299 355 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 DLGAP3O95886 979 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 LDLRP01130 860 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 FUCA1P04066 466 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CEACAM5P06731 702 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TYRP1P17643 537 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 SDC4P31431 198 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ADRA1BP35368 520 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ETV3P41162 512 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 GPR1P46091 355 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 SCNN1BP51168 640 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 MCCD1P59942 119 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 SH3BP2P78314 561 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 SEMA5AQ13591 1074 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 DNASE1L3Q13609 305 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 GRM3Q14832 879 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 NR1D2Q14995 579 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CYTH1Q15438 398 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TRIM65Q6PJ69 517 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CHST15Q7LFX5 561 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 NLRP14Q86W24 1093 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 XYLT1Q86Y38 959 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TICAM1Q8IUC6 712 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ZDHHC17Q8IUH5 632 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 HSCBQ8IWL3 235 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 PYROXD2Q8N2H3 581 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CCDC185Q8N715 623 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TTC13Q8NBP0 860 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 MSANTD4Q8NCY6 345 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF397Q8NF99 534 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CT55Q8WUE5 264 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CPA5Q8WXQ8 436 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 PGAP3Q96FM1 320 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CELF6Q96J87 481 aaKnown RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CINPQ9BW66 212 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TBC1D10AQ9BXI6 508 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 UNKQ9C0B0 810 aaKnown RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ACTL8Q9H568 366 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 FBXO8Q9NRD0 319 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TMEM248Q9NWD8 314 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TRNAU1APQ9NX07 287 aaKnown RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 B4GALT6Q9UBX8 382 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CNOT8Q9UFF9 292 aaKnown RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ZNHIT2Q9UHR6 403 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 PCDHGC3Q9UN70 934 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 CNTN6Q9UQ52 1028 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 SLC5A6Q9Y289 635 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 TMEM184BQ9Y519 407 aaPredicted RBP6.85□□□□□ -1.31
HDAC1-204ENST00000471488 FBN2P35556 2912 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ESPL1Q14674 2120 aa6.85□□□□□ -1.31
HDAC1-204ENST00000471488 ANKUB1A6NFN9 424 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 WIPF3A6NGB9 483 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 J3KR12 359 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 DFFAO00273 331 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 BIN1O00499 593 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 PES1O00541 588 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 PMM2O15305 246 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 DPM1O60762 260 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 PALMO75781 387 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 SNRPB2P08579 225 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 PRF1P14222 555 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms