RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TCRBV9S1A1TA0A576 114 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 CCDC151A5D8V7 595 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 IGLON5A6NGN9 336 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 E7EVH7 732 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 HRO43593 1189 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 SYNCRIPO60506 623 aaKnown RBP9.87□□□□□ -0.83
SF3A1-207ENST00000471342 C6P13671 934 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 AVPR2P30518 371 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 ACTN2P35609 894 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 ETV3P41162 512 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 RECQLP46063 649 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-207ENST00000471342 CXCL12P48061 93 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 RAD51Q06609 339 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 SLC29A2Q14542 456 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 EFTUD2Q15029 972 aaKnown RBP eCLIP9.87□□□□□ -0.83
SF3A1-207ENST00000471342 BRD3Q15059 726 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 FAM46CQ5VWP2 391 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 KIAA0930Q6ICG6 404 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-207ENST00000471342 SH2D5Q6ZV89 423 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 SLC41A1Q8IVJ1 513 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 RAVER1Q8IY67 606 aaKnown RBP9.87□□□□□ -0.83
SF3A1-207ENST00000471342 ZBED8Q8IZ13 594 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 PDIK1LQ8N165 341 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 CAMKK1Q8N5S9 505 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 DTWD2Q8NBA8 298 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 OR4K2Q8NGD2 314 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 BLOC1S5Q8TDH9 187 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 HMGB4Q8WW32 186 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 ASB12Q8WXK4 309 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 HDAC10Q969S8 669 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 RAB7BQ96AH8 199 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 RMDN1Q96DB5 314 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 STAMBPL1Q96FJ0 436 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 DTD2Q96FN9 168 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 IFT43Q96FT9 208 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 BMFQ96LC9 184 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 FSD1LQ9BXM9 530 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 ADGRE3Q9BY15 652 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 TPSD1Q9BZJ3 242 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 TRABDQ9H4I3 376 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 C6orf106Q9H6K1 298 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-207ENST00000471342 ZFYVE1Q9HBF4 777 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 GULP1Q9UBP9 304 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 FKBPLQ9UIM3 349 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 SCML1Q9UN30 329 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 SLC8A2Q9UPR5 921 aa9.87□□□□□ -0.83
SF3A1-207ENST00000471342 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.87□□□□□ -0.83
SF3A1-207ENST00000471342 ANKRD36A6QL64 1941 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 IGLV3-16A0A075B6K0 115 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 UQCRHLA0A096LP55 91 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 CCDC163A0A0D9SF12 145 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 MAGEB16A2A368 324 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 FAM86C2PA6NEL3 165 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 PRR19A6NJB7 356 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 C1QTNF3-AMACRE9PGA6 284 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 PSMD11O00231 422 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 MAP2K7O14733 419 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 LILRB5O75023 590 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 ATG13O75143 517 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 RECQL5O94762 991 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-207ENST00000471342 WISP3O95389 354 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-207ENST00000471342 APBB3O95704 486 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 GOT2P00505 430 aaKnown RBP9.86□□□□□ -0.83
SF3A1-207ENST00000471342 UQCRHP07919 91 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 ABHD2P08910 425 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 TSHRP16473 764 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 PGAM1P18669 254 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A6P19224 532 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 LPOP22079 712 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A1P22309 533 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A4P22310 534 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A3P35503 534 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A5P35504 534 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 TRIM23P36406 574 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 MAGEA9P43362 315 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 PMS2P54278 862 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 DCDC1P59894 354 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 SRSF5Q13243 272 aaKnown RBP9.86□□□□□ -0.83
SF3A1-207ENST00000471342 STARD3Q14849 445 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 PSAPL1Q6NUJ1 521 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF549Q6P9A3 640 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 EMBQ6PCB8 327 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 PPP1R21Q6ZMI0 780 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 DSG4Q86SJ6 1040 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 WDR5BQ86VZ2 330 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 C1orf210Q8IVY1 113 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 FBXL6Q8N531 539 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 DNAAF3Q8N9W5 541 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 TMEM145Q8NBT3 493 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 TSTD1Q8NFU3 115 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 GPR150Q8NGU9 434 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 STYXQ8WUJ0 223 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 WRAP53Q9BUR4 548 aaKnown RBP9.86□□□□□ -0.83
SF3A1-207ENST00000471342 BFARQ9NZS9 450 aa9.86□□□□□ -0.83
SF3A1-207ENST00000471342 ZC3H7BQ9UGR2 993 aaKnown RBP9.86□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF318Q5VUA4 2279 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 VPS13AQ96RL7 3174 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 C1orf232A0A0U1RR37 186 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 A0A1W2PQU0 124 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 HEATR9A2RTY3 570 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms