RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SLC26A3P40879 764 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 MAGEA12P43365 314 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 SERPINB8P50452 374 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 SCNN1BP51168 640 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 MAXP61244 160 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 MRPS21P82921 87 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 CBX1P83916 185 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 THOC5Q13769 683 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 POU6F1Q14863 301 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 AARS2Q5JTZ9 985 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 HP1BP3Q5SSJ5 553 aaPredicted RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 SYCP2LQ5T4T6 812 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 ARMC12Q5T9G4 340 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 TEDDM1Q5T9Z0 273 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 RNF187Q5TA31 235 aaPredicted RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 MRNIPQ6NTE8 343 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 C22orf39Q6P5X5 142 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 TRMT10BQ6PF06 316 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 BRAT1Q6PJG6 821 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 UNQ6494/PRO21346Q6UXR6 183 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 TPGS1Q6ZTW0 290 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 SRRM1Q8IYB3 904 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 RPLP0P6Q8NHW5 317 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 RIN3Q8TB24 985 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 WFDC5Q8TCV5 224 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 DTX3LQ8TDB6 740 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 ECHDC3Q96DC8 303 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 APOPT1Q96IL0 206 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 FCRL3Q96P31 734 aaPredicted RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 GPR22Q99680 433 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 RBBP8Q99708 897 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 CDH19Q9H159 772 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 HPS4Q9NQG7 708 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 CHRAC1Q9NRG0 131 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 RXFP3Q9NSD7 469 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 C20orf96Q9NUD7 363 aaPredicted RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 INTS6Q9UL03 887 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 COL4A2P08572 1712 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 LAMA1P25391 3075 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 C4orf47A7E2U8 309 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 TRAFD1O14545 582 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 LDB2O43679 373 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 PRLP01236 227 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 MPOP05164 745 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 APOA4P06727 396 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 ITGA2BP08514 1039 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 SRCP12931 536 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 KRT4P19013 534 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CD9P21926 228 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 GLDCP23378 1020 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CD70P32970 193 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 LSP1P33241 339 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CRHR1P34998 444 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 PPARGP37231 505 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 RECQLP46063 649 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CCT5P48643 541 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 PXNP49023 591 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 DGKGP49619 791 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 ZNF140P52738 457 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 ADARP55265 1226 aaKnown RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 POLR2LP62875 67 aaKnown RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CRADDP78560 199 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 IL9RQ01113 521 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 BCL2L1Q07817 233 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 FUT11Q495W5 492 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 PMS2CLQ68D20 193 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 NEPROQ6NW34 567 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 AFTPHQ6ULP2 937 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 KYAT3Q6YP21 454 aaKnown RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CAPN12Q6ZSI9 719 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 SH2D5Q6ZV89 423 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 LPCAT2Q7L5N7 544 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 ADIPOR2Q86V24 386 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 TRIM42Q8IWZ5 723 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 BANPQ8N9N5 519 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 C2CD4AQ8NCU7 369 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CEP76Q8TAP6 659 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 RAB3IL1Q8TBN0 382 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 DENND1AQ8TEH3 1009 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 MFSD3Q96ES6 412 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 MYO19Q96H55 970 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 SMG9Q9H0W8 520 aaKnown RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 VPS11Q9H270 941 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 POLMQ9NP87 494 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 PPANQ9NQ55 473 aaKnown RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 RAD18Q9NS91 495 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 INTS10Q9NVR2 710 aaKnown RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 NLE1Q9NVX2 485 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-207ENST00000471218 DEC1Q9P2X7 70 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 CTNNAL1Q9UBT7 734 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 TBK1Q9UHD2 729 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 MID2Q9UJV3 735 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms