RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 PDFQ9HBH1 243 aa11.61□□□□□ -0.55
HLA-C-206ENST00000470363 MBNL1Q9NR56 388 aaKnown RBP11.61□□□□□ -0.55
HLA-C-206ENST00000470363 LHX3Q9UBR4 397 aa11.61□□□□□ -0.55
HLA-C-206ENST00000470363 ZNF148Q9UQR1 794 aa11.61□□□□□ -0.55
HLA-C-206ENST00000470363 COL27A1Q8IZC6 1860 aaPredicted RBP11.6□□□□□ -0.55
HLA-C-206ENST00000470363 TSPAN11A1L157 253 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 EFCAB8A8MWE9 144 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 CASC3O15234 703 aaKnown RBP11.6□□□□□ -0.55
HLA-C-206ENST00000470363 INSIG1O15503 277 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 AQP9O43315 295 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 MMP20O60882 483 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 ALPPL2P10696 532 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 JUNDP17535 347 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 RBL1P28749 1068 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 LSSP48449 732 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 NR2C2P49116 596 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 DUSP3P51452 185 aaPredicted RBP11.6□□□□□ -0.55
HLA-C-206ENST00000470363 GDF10P55107 478 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 YPEL5P62699 121 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 DR1Q01658 176 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 TLE3Q04726 772 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 TRIP13Q15645 432 aaPredicted RBP11.6□□□□□ -0.55
HLA-C-206ENST00000470363 PARP15Q460N3 678 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 AFMIDQ63HM1 303 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 RBFAQ8N0V3 343 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 RYBPQ8N488 228 aaPredicted RBP11.6□□□□□ -0.55
HLA-C-206ENST00000470363 GLIS1Q8NBF1 620 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 ATL2Q8NHH9 583 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 GDAP1L1Q96MZ0 367 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 OLFM3Q96PB7 478 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 TRIM51Q9BSJ1 452 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 CLPBQ9H078 707 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 HOMER3Q9NSC5 361 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 DMGDHQ9UI17 866 aaKnown RBP11.6□□□□□ -0.55
HLA-C-206ENST00000470363 DRG1Q9Y295 367 aaKnown RBP11.6□□□□□ -0.55
HLA-C-206ENST00000470363 CFAP46Q8IYW2 2715 aa11.6□□□□□ -0.55
HLA-C-206ENST00000470363 LMO7DNF2Z398 122 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 J3KR12 359 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 TOR1BO14657 336 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 KCNN4O15554 427 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 ZSCAN5DPP0CG00 497 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 SERPINB6P35237 376 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 ACTN2P35609 894 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 FNTAP49354 379 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 VPS41P49754 854 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 PAPOLAP51003 745 aaKnown RBP11.59□□□□□ -0.55
HLA-C-206ENST00000470363 SUOXP51687 545 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 SKOR1P84550 965 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 GALNT2Q10471 571 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 AP1B1Q10567 949 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 AGERQ15109 404 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 PDK1Q15118 436 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 ISXQ2M1V0 245 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 DEFB133Q30KQ1 61 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 LRRC73Q5JTD7 316 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 C8orf74Q6P047 294 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 GUSBP11Q6P575 273 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 DRICH1Q6PGQ1 229 aaPredicted RBP11.59□□□□□ -0.55
HLA-C-206ENST00000470363 IGF2-ASQ6U949 168 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 GSTA5Q7RTV2 222 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 ZSWIM9Q86XI8 627 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 ZNF354CQ86Y25 554 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 JAMLQ86YT9 394 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 SPACA3Q8IXA5 215 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 LZTR1Q8N653 840 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 FAM71DQ8N9W8 422 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 CCNYQ8ND76 341 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 MYRIPQ8NFW9 859 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 IFI44Q8TCB0 444 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 TFB1MQ8WVM0 346 aaKnown RBP11.59□□□□□ -0.55
HLA-C-206ENST00000470363 UBXN4Q92575 508 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 PRR11Q96HE9 360 aaPredicted RBP11.59□□□□□ -0.55
HLA-C-206ENST00000470363 NSMCE3Q96MG7 304 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 CEP41Q9BYV8 373 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
HLA-C-206ENST00000470363 ASCL3Q9NQ33 180 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 PCYOX1Q9UHG3 505 aa11.59□□□□□ -0.55
HLA-C-206ENST00000470363 TDRD6O60522 2096 aaKnown RBP11.59□□□□□ -0.55
HLA-C-206ENST00000470363 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
HLA-C-206ENST00000470363 H3BM21 787 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 TK2O00142 265 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 NEMP1O14524 444 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 YY2O15391 372 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 RRP8O43159 456 aaKnown RBP11.58□□□□□ -0.56
HLA-C-206ENST00000470363 PRAMEF11O60813 436 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 USP12O75317 370 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 CSO75390 466 aaKnown RBP11.58□□□□□ -0.56
HLA-C-206ENST00000470363 C1QL1O75973 258 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 TM7SF2O76062 418 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 ECEL1O95672 775 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 IFNB1P01574 187 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 KRT14P02533 472 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 MPOP05164 745 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 GARSP41250 739 aaKnown RBP11.58□□□□□ -0.56
HLA-C-206ENST00000470363 CSNK1DP48730 415 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 NDST2P52849 883 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 TERF1P54274 439 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 XRCC4Q13426 336 aa11.58□□□□□ -0.56
HLA-C-206ENST00000470363 PTK2BQ14289 1009 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms