RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 PCDH12Q9NPG4 1184 aa15.12■□□□□ 0.01
COL4A5-203ENST00000470339 DYRK4Q9NR20 520 aa15.12■□□□□ 0.01
COL4A5-203ENST00000470339 RAD18Q9NS91 495 aa15.12■□□□□ 0.01
COL4A5-203ENST00000470339 CATSPERZQ9NTU4 200 aa15.12■□□□□ 0.01
COL4A5-203ENST00000470339 B4GALT6Q9UBX8 382 aa15.12■□□□□ 0.01
COL4A5-203ENST00000470339 APPL1Q9UKG1 709 aa15.12■□□□□ 0.01
COL4A5-203ENST00000470339 HMX2A2RU54 273 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 SHISA7A6NL88 538 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 TRIM49D1C9J1S8 452 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 H0Y858 1186 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 GOLGA8TH3BQL2 631 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PSMD11O00231 422 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PFDN6O15212 129 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 ADH1BP00325 375 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 IL1BP01584 269 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 AHSGP02765 367 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 ITGA2BP08514 1039 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 NR1D1P20393 614 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 SLC1A2P43004 574 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 STC1P52823 247 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 SLC18A1P54219 525 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 SEC13P55735 322 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PPP2R2AP63151 447 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 XIAPP98170 497 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PTSQ03393 145 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PRKCQQ04759 706 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 CCDC15Q0P6D6 951 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 ELP6Q0PNE2 266 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 ARHGEF7Q14155 803 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 STARD3Q14849 445 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PTPRRQ15256 657 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 MLF2Q15773 248 aaPredicted RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 TYSND1Q2T9J0 566 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 FASTKD1Q53R41 847 aaKnown RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 LRRC66Q68CR7 880 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PARS2Q7L3T8 475 aaKnown RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PTAR1Q7Z6K3 402 aaPredicted RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 ZC3HC1Q86WB0 502 aaKnown RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 SRRM1Q8IYB3 904 aaKnown RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 IL17RCQ8NAC3 791 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 OR2T3Q8NH03 318 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 ACMSDQ8TDX5 336 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 ARRDC3Q96B67 414 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 PLEKHG4BQ96PX9 1271 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 CDH19Q9H159 772 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 SUDS3Q9H7L9 328 aaPredicted RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 CNOT10Q9H9A5 744 aaKnown RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 INTS10Q9NVR2 710 aaKnown RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 NFKBIL1Q9UBC1 381 aaPredicted RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 CORO1CQ9ULV4 474 aaPredicted RBP15.11■□□□□ 0.01
COL4A5-203ENST00000470339 SORCS3Q9UPU3 1222 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 VPS9D1Q9Y2B5 631 aa15.11■□□□□ 0.01
COL4A5-203ENST00000470339 LRRK1Q38SD2 2015 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 A0A0C4DFX4 3053 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 S1PR4O95977 384 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 BPIP17213 487 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 C5AR1P21730 350 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 LHCGRP22888 699 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 GABRB3P28472 473 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 FOXN2P32314 431 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 MMP12P39900 470 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 CD151P48509 253 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 NEK3P51956 506 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 SATB1Q01826 763 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 ZP2Q05996 745 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 CACNG1Q06432 222 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 CTBP1Q13363 440 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 PEX6Q13608 980 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 CCINQ13939 588 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 C2orf27AQ580R0 203 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 AARS2Q5JTZ9 985 aaKnown RBP15.1■□□□□ 0.01
COL4A5-203ENST00000470339 MROH9Q5TGP6 573 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 LYPLAL1Q5VWZ2 237 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 FBXL19Q6PCT2 694 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 CERS6Q6ZMG9 384 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 ZNF852Q6ZMS4 543 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 KDM7AQ6ZMT4 941 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 ERN2Q76MJ5 926 aaKnown RBP15.1■□□□□ 0.01
COL4A5-203ENST00000470339 TSPAN33Q86UF1 283 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 MMAAQ8IVH4 418 aaKnown RBP15.1■□□□□ 0.01
COL4A5-203ENST00000470339 DENND6AQ8IWF6 608 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 ISL2Q96A47 359 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 PBXIP1Q96AQ6 731 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 SMC6Q96SB8 1091 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 GPR22Q99680 433 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 BPIFA1Q9NP55 256 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 PKD2L2Q9NZM6 624 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 SLC17A6Q9P2U8 582 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 WNT16Q9UBV4 365 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 FKBPLQ9UIM3 349 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 SMG5Q9UPR3 1016 aaKnown RBP15.1■□□□□ 0.01
COL4A5-203ENST00000470339 PLXNA2O75051 1894 aa15.1■□□□□ 0.01
COL4A5-203ENST00000470339 A0A1W2PPM1 405 aa15.09■□□□□ 0.01
COL4A5-203ENST00000470339 ANTXRLA6NF34 631 aa15.09■□□□□ 0.01
COL4A5-203ENST00000470339 CCL22O00626 93 aa15.09■□□□□ 0.01
COL4A5-203ENST00000470339 AREL1O15033 823 aa15.09■□□□□ 0.01
COL4A5-203ENST00000470339 PRPF4O43172 522 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL4A5-203ENST00000470339 AP1G1O43747 822 aa15.09■□□□□ 0.01
COL4A5-203ENST00000470339 ADAM23O75077 832 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms