RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 RNPS1Q15287 305 aaKnown RBP4.34□□□□□ -1.71
SRRM1-208ENST00000470243 TOMM20Q15388 145 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 MED22Q15528 200 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 MEA1Q16626 185 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 PIK3CD-AS1Q5SR53 167 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 TXNDC8Q6A555 127 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 LRRC8EQ6NSJ5 796 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 SERPINA11Q86U17 422 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 TDRPQ86YL5 185 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 LURAP1LQ8IV03 231 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 KIAA2013Q8IYS2 634 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 HORMAD2Q8N7B1 307 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 ZMIZ2Q8NF64 920 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 TMEM170AQ8WVE7 144 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 INTS12Q96CB8 462 aaKnown RBP4.34□□□□□ -1.71
SRRM1-208ENST00000470243 TREX2Q9BQ50 279 aaPredicted RBP4.34□□□□□ -1.71
SRRM1-208ENST00000470243 SEMA4CQ9C0C4 833 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 LHPPQ9H008 270 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 MUC13Q9H3R2 512 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 RNF146Q9NTX7 359 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 TBC1D29Q9UFV1 150 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 LIMA1Q9UHB6 759 aaKnown RBP4.34□□□□□ -1.71
SRRM1-208ENST00000470243 INTS6Q9UL03 887 aaKnown RBP4.34□□□□□ -1.71
SRRM1-208ENST00000470243 ABT1Q9ULW3 272 aaKnown RBP4.34□□□□□ -1.71
SRRM1-208ENST00000470243 NOL7Q9UMY1 257 aaKnown RBP4.34□□□□□ -1.71
SRRM1-208ENST00000470243 KCNE2Q9Y6J6 123 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 ALPK3Q96L96 1907 aa4.34□□□□□ -1.71
SRRM1-208ENST00000470243 KDM3BQ7LBC6 1761 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 HSPB2A8KAH6 182 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 AP3D1O14617 1153 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 RNMTO43148 476 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 LIASO43766 372 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CNOT3O75175 753 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 TIPRLO75663 272 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CCNDBP1O95273 360 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CLDN7O95471 211 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 TOP3BO95985 862 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 PSMA4P25789 261 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 NFKBIAP25963 317 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CLCN5P51795 746 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 NAP1L1P55209 391 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 HDAC4P56524 1084 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 OLR1P78380 273 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 DDR1Q08345 913 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 PRKG2Q13237 762 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 RUNX2Q13950 521 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 HSPB2Q16082 182 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 ALG11Q2TAA5 492 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 SPATA1Q5VX52 437 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 ATG9BQ674R7 924 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 TMEM71Q6P5X7 295 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CASC1Q6TDU7 716 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CYP20A1Q6UW02 462 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 ANKRD13BQ86YJ7 626 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 DHX40Q8IX18 779 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 FAM185AQ8N0U4 392 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 SLC44A5Q8NCS7 719 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 MSI2Q96DH6 328 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 PABPC5Q96DU9 382 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 TIGD1Q96MW7 591 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 BBS4Q96RK4 519 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 WDR83Q9BRX9 315 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CDK19Q9BWU1 502 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 API5Q9BZZ5 524 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 B3GNT4Q9C0J1 378 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 GHITMQ9H3K2 345 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 MAP6D1Q9H9H5 199 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 EIF2B3Q9NR50 452 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 SEPT11Q9NVA2 429 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 A4GNTQ9UNA3 340 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 COG5Q9UP83 839 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 DDX49Q9Y6V7 483 aaKnown RBP4.33□□□□□ -1.72
SRRM1-208ENST00000470243 USP34Q70CQ2 3546 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 CFAP54Q96N23 3096 aa4.33□□□□□ -1.72
SRRM1-208ENST00000470243 EDC4Q6P2E9 1401 aaKnown RBP4.32□□□□□ -1.72
SRRM1-208ENST00000470243 FAM237BA0A1B0GVD1 139 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 ZNF814B7Z6K7 855 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 NPIPB11E5RHQ5 1161 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 EBAG9O00559 213 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 PRPF4O43172 522 aaKnown RBP eCLIP4.32□□□□□ -1.723e-6■■■□□ 16.6
SRRM1-208ENST00000470243 TLX3O43711 291 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-208ENST00000470243 TLR2O60603 784 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 ATP2C2O75185 946 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 REC8O95072 547 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 CELA2AP08217 269 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 PRR35P0CG20 571 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 TTKP33981 857 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 RYKP34925 604 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 RFC1P35251 1148 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-208ENST00000470243 CENPAP49450 140 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 GRIK3Q13003 919 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 MAMLD1Q13495 774 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 MTX1Q13505 466 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 ITPK1Q13572 414 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 PDE1CQ14123 709 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-208ENST00000470243 PPP2R5BQ15173 497 aa4.32□□□□□ -1.72
SRRM1-208ENST00000470243 INPP5JQ15735 1006 aaPredicted RBP4.32□□□□□ -1.72
SRRM1-208ENST00000470243 ZSCAN23Q3MJ62 389 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms