RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 PIH1D2Q8WWB5 315 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 TTC9Q92623 222 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 DTD2Q96FN9 168 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 WBP1Q96G27 269 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 CCNL2Q96S94 520 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 FUCA2Q9BTY2 467 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 NUP85Q9BW27 656 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 SEMA4CQ9C0C4 833 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 SEMA6CQ9H3T2 930 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 PHPT1Q9NRX4 125 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-210ENST00000469897 GOLGA6AQ9NYA3 693 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 ANAPC7Q9UJX3 599 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 SUFUQ9UMX1 484 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 PPIL1Q9Y3C6 166 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 LOXL2Q9Y4K0 774 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 PCDHGA7Q9Y5G6 932 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 ASXL3Q9C0F0 2248 aa13.27□□□□□ -0.29
CPSF4-210ENST00000469897 MYO1FO00160 1098 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 ECEL1O95672 775 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 SERPING1P05155 500 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 CYP1A2P05177 515 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 NFKBIAP25963 317 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 UBASH3AP57075 661 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 CDK3Q00526 305 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 CTBSQ01459 385 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 CCDC122Q5T0U0 273 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 RAET1GQ6H3X3 334 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 DOK6Q6PKX4 331 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 PIM3Q86V86 326 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 TEX26Q8N6G2 289 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 NIPA2Q8N8Q9 360 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 KIAA1524Q8TCG1 905 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 ZDHHC1Q8WTX9 485 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 LRRN4Q8WUT4 740 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 SYN2Q92777 582 aaPredicted RBP13.26□□□□□ -0.29
CPSF4-210ENST00000469897 SEMA3CQ99985 751 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 FRMD8Q9BZ67 464 aaPredicted RBP13.26□□□□□ -0.29
CPSF4-210ENST00000469897 RDH14Q9HBH5 336 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 CBX8Q9HC52 389 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 TRNAU1APQ9NX07 287 aaKnown RBP13.26□□□□□ -0.29
CPSF4-210ENST00000469897 KCTD5Q9NXV2 234 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 TAAR2Q9P1P5 351 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 CD84Q9UIB8 345 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 TMEM98Q9Y2Y6 226 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 PLEKHM1Q9Y4G2 1056 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 ST14Q9Y5Y6 855 aa13.26□□□□□ -0.29
CPSF4-210ENST00000469897 A0A1W2PQJ5 194 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 PSMD11O00231 422 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 NVLO15381 856 aaKnown RBP13.25□□□□□ -0.29
CPSF4-210ENST00000469897 FZD6O60353 706 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 MAP3K6O95382 1288 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 KRT10P13645 584 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 SERPINB6P35237 376 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ADCY8P40145 1251 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 PBX1P40424 430 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ETV5P41161 510 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 GPR1P46091 355 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 MAPK10P53779 464 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ZBED6P86452 979 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 PTSQ03393 145 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ILF3Q12906 894 aaKnown RBP eCLIP13.25□□□□□ -0.29
CPSF4-210ENST00000469897 SRSF6Q13247 344 aaKnown RBP13.25□□□□□ -0.29
CPSF4-210ENST00000469897 IHHQ14623 411 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 RALGPS1Q5JS13 557 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 PHF19Q5T6S3 580 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ALKBH5Q6P6C2 394 aaKnown RBP13.25□□□□□ -0.29
CPSF4-210ENST00000469897 SLC30A9Q6PML9 568 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ZNF574Q6ZN55 896 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-210ENST00000469897 USP45Q70EL2 814 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 C17orf82Q86X59 251 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ZFAND4Q86XD8 727 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 CPNE8Q86YQ8 564 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 NDUFAF2Q8N183 169 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 PATE1Q8WXA2 126 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 USP7Q93009 1102 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 SCAMP4Q969E2 229 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 MCCC1Q96RQ3 725 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-210ENST00000469897 CMKLR1Q99788 373 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 GSDMCQ9BYG8 508 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 ABCG8Q9H221 673 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 CAPN11Q9UMQ6 739 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 SLC17A4Q9Y2C5 497 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 MYLKQ15746 1914 aa13.25□□□□□ -0.29
CPSF4-210ENST00000469897 TRBV23OR9-2A0A075B6M9 112 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 PRAMEF33A0A0G2JMD5 474 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 SYCE3A1L190 88 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 CAPN8A6NHC0 703 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 MATN3O15232 486 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 PPM1DO15297 605 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 PRAMEF10O60809 474 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 GARSP41250 739 aaKnown RBP13.24□□□□□ -0.29
CPSF4-210ENST00000469897 ARSEP51690 589 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 TPM4P67936 248 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 DPTQ07507 201 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 BIRC2Q13490 618 aa13.24□□□□□ -0.29
CPSF4-210ENST00000469897 HADHQ16836 314 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms