RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 EP400NLQ6ZTU2 488 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 SPNS2Q8IVW8 549 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 SPATA6LQ8N4H0 392 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 PPP1R14CQ8TAE6 165 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 FRS2Q8WU20 508 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 TSPAN17Q96FV3 270 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 HPS4Q9NQG7 708 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 INTS10Q9NVR2 710 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 SLC8A2Q9UPR5 921 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 RUVBL2Q9Y230 463 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 SLC27A6Q9Y2P4 619 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 VWA7Q9Y334 891 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 COL4A3Q01955 1670 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 A0A087X1B8 175 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 H7C0S8 307 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 CLDN7O95471 211 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ASLP04424 464 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 COL6A2P12110 1019 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 CPA3P15088 417 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 HOXB8P17481 243 aaPredicted RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 CDKN2DP55273 166 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 SEMG2Q02383 582 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 OVGP1Q12889 678 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ADAM15Q13444 863 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 GRM2Q14416 872 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 PDGFRLQ15198 375 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 PTPRNQ16849 979 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 CES4AQ5XG92 561 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 FAM45BPQ6NSW5 357 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ZNF549Q6P9A3 640 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 KIAA1549LQ6ZVL6 1849 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 TBC1D1Q86TI0 1168 aaPredicted RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 SPATS2Q86XZ4 545 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 C10orf107Q8IVU9 208 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 TTC8Q8TAM2 541 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 FAM45AQ8TCE6 357 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 NXNL1Q96CM4 212 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 SCYL1Q96KG9 808 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ZNF641Q96N77 438 aaPredicted RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 MYADMQ96S97 322 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 UNKQ9C0B0 810 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 ZNF106Q9H2Y7 1883 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 MTG2Q9H4K7 406 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 CLEC1BQ9P126 229 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 CPSF2Q9P2I0 782 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 NPIPB15A6NHN6 443 aaPredicted RBP18.1■□□□□ 0.49
SMC4-211ENST00000469858 TK2O00142 265 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 NDUFS3O75489 264 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 KDSRQ06136 332 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 DLX2Q07687 328 aaPredicted RBP18.1■□□□□ 0.49
SMC4-211ENST00000469858 DLG1Q12959 904 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 DBN1Q16643 649 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 GRAMD4Q6IC98 578 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 USP45Q70EL2 814 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 TSPAN33Q86UF1 283 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 PIM3Q86V86 326 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 LCA5Q86VQ0 697 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 PIANPQ8IYJ0 282 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 ZNF366Q8N895 744 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 RAB3IL1Q8TBN0 382 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 KLHL32Q96NJ5 620 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 ZNF576Q9H609 170 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 GPAMQ9HCL2 828 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 DEC1Q9P2X7 70 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 CORO1CQ9ULV4 474 aaPredicted RBP18.1■□□□□ 0.49
SMC4-211ENST00000469858 SZT2Q5T011 3432 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 WASH3PC4AMC7 463 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 PRRT4C9JH25 899 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 GPR39O43194 453 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 TBX10O75333 385 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 KLHL2O95198 593 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 SRPRAP08240 638 aaKnown RBP18.1■□□□□ 0.49
SMC4-211ENST00000469858 FGF3P11487 239 aaPredicted RBP18.1■□□□□ 0.49
SMC4-211ENST00000469858 XIAPP98170 497 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 CDKN3Q16667 212 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 C6orf89Q6UWU4 347 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 GDPD4Q6W3E5 623 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 PLPP6Q8IY26 295 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 NXPE3Q969Y0 559 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 KXD1Q9BQD3 176 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 HEPHQ9BQS7 1158 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 PLA2G2FQ9BZM2 168 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 NPHS2Q9NP85 383 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 ELOVL2Q9NXB9 296 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.1■□□□□ 0.49
SMC4-211ENST00000469858 ARL2BPQ9Y2Y0 163 aa18.1■□□□□ 0.49
SMC4-211ENST00000469858 APOA4P06727 396 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 ST8SIA6P61647 398 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 ILF2Q12905 390 aaKnown RBP18.09■□□□□ 0.49
SMC4-211ENST00000469858 STX3Q13277 289 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 CSHL1Q14406 222 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 TSNAXIP1Q2TAA8 658 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 LRRC73Q5JTD7 316 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 LRRC8EQ6NSJ5 796 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 FAM151BQ6UXP7 276 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 YAF2Q8IY57 180 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 FSTL5Q8N475 847 aaPredicted RBP18.09■□□□□ 0.49
SMC4-211ENST00000469858 LPGAT1Q92604 370 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 SCRN2Q96FV2 425 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 TCF12Q99081 682 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms