RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 GGT7Q9UJ14 662 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 ITM2BQ9Y287 266 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 TDRD6O60522 2096 aaKnown RBP17.71■□□□□ 0.43
MRPL28-208ENST00000469744 CXorf51AA0A1B0GTR3 108 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 E7EVH7 732 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 PRAMEF26H0Y7S4 382 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 ZNF189O75820 626 aaPredicted RBP17.71■□□□□ 0.43
MRPL28-208ENST00000469744 GSRP00390 522 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 NUDT1P36639 197 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 ABL2P42684 1182 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 GRK6P43250 576 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 CLDN2P57739 230 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 YBEYP58557 167 aaPredicted RBP17.71■□□□□ 0.43
MRPL28-208ENST00000469744 RHOAP61586 193 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 IFI35P80217 286 aaPredicted RBP17.71■□□□□ 0.43
MRPL28-208ENST00000469744 MYLK3Q32MK0 819 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 PARP15Q460N3 678 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 CCDC157Q569K6 752 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 PPP1R21Q6ZMI0 780 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 RAB44Q7Z6P3 723 aaPredicted RBP17.71■□□□□ 0.43
MRPL28-208ENST00000469744 GLRX5Q86SX6 157 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 TMEM145Q8NBT3 493 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 PCDH19Q8TAB3 1148 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 UHMK1Q8TAS1 419 aaKnown RBP17.71■□□□□ 0.43
MRPL28-208ENST00000469744 CPT1BQ92523 772 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 ZMYND15Q9H091 742 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 CAAP1Q9H8G2 361 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 TOR4AQ9NXH8 423 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 FADS3Q9Y5Q0 445 aa17.71■□□□□ 0.43
MRPL28-208ENST00000469744 GMNCA6NCL1 334 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 C16orf96A6NNT2 1141 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 J3KR12 359 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 DFNA5O60443 496 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 FAM107AO95990 144 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 GDF10P55107 478 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 BNIP3Q12983 259 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 FGL2Q14314 439 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 HIF1AQ16665 826 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 ST3GAL2Q16842 350 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 TMEM259Q4ZIN3 620 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 ZNF805Q5CZA5 627 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 TTC19Q6DKK2 380 aaPredicted RBP17.7■□□□□ 0.42
MRPL28-208ENST00000469744 NEK5Q6P3R8 708 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 UNQ6494/PRO21346Q6UXR6 183 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 RFX8Q6ZV50 586 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 B4GALNT4Q76KP1 1039 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 CDKL3Q8IVW4 592 aaPredicted RBP17.7■□□□□ 0.42
MRPL28-208ENST00000469744 PLPP6Q8IY26 295 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 PWWP2AQ96N64 755 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 KLHL32Q96NJ5 620 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 CDC6Q99741 560 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 CCDC134Q9H6E4 229 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 USP29Q9HBJ7 922 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 EURLQ9NYK6 297 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 LHX3Q9UBR4 397 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 PTPRBP23467 1997 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 WDFY3Q8IZQ1 3526 aa17.7■□□□□ 0.42
MRPL28-208ENST00000469744 H7C0C1 242 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 NDUFAB1O14561 156 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 INSIG1O15503 277 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 TRIM16O95361 564 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 POP4O95707 220 aaKnown RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 HNRNPA2B1P22626 353 aaKnown RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 AKT2P31751 481 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 MAGEA6P43360 314 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 ATP5OP48047 213 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 ARRB1P49407 418 aaPredicted RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 CYTH1Q15438 398 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 LONRF1Q17RB8 773 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 BZW1Q7L1Q6 419 aaKnown RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 EXOC3L1Q86VI1 746 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 IQCHQ86VS3 1027 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 NPWQ8N729 165 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 FAM71DQ8N9W8 422 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 SAP25Q8TEE9 199 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 KLHDC7BQ96G42 594 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 C9orf72Q96LT7 481 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 SLC39A8Q9C0K1 460 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 UBA2Q9UBT2 640 aaPredicted RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 SLC24A2Q9UI40 661 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 APOBEC2Q9Y235 224 aaKnown RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 MFHAS1Q9Y4C4 1052 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 NEUROG3Q9Y4Z2 214 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 ARID1BQ8NFD5 2236 aaPredicted RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 SMIM23A6NLE4 172 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 EBAG9O00559 213 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 ZZEF1O43149 2961 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 SPINT1O43278 529 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 SDC3O75056 442 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 IGSF6O95976 241 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 THEGLP0DJG4 465 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 ERCC2P18074 760 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 EPHA8P29322 1005 aaPredicted RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 HTR7P34969 479 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 PHBP35232 272 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 SLCO1A2P46721 670 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 PAPOLAP51003 745 aaKnown RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 INO80DQ53TQ3 878 aaPredicted RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 NPNTQ6UXI9 565 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 GDPD4Q6W3E5 623 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms