RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SRP72O76094 671 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 PIGNO95427 931 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 POP4O95707 220 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 HSPA4LO95757 839 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 MT-CO1P00395 513 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 CYP17A1P05093 508 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 SRPRAP08240 638 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 F7P08709 466 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ADH5P11766 374 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ITGALP20701 1170 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 CD9P21926 228 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 KCNA4P22459 653 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 FSHRP23945 695 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ABL2P42684 1182 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 DGKGP49619 791 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 SUOXP51687 545 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 PTPN5P54829 565 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ABCE1P61221 599 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 POLR2LP62875 67 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ITGA9Q13797 1035 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ACAP2Q15057 778 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 TBCCQ15814 346 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 MYLK3Q32MK0 819 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 CARD16Q5EG05 197 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ZRANB3Q5FWF4 1079 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 TECRLQ5HYJ1 363 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ZCCHC23Q6ZST2 131 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 LYSMD3Q7Z3D4 306 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 CAMK1DQ8IU85 385 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 SLC22A9Q8IVM8 553 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 MFSD6LQ8IWD5 586 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 FSTL5Q8N475 847 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 AFAP1L2Q8N4X5 818 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ACVR1CQ8NER5 493 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 VN1R2Q8NFZ6 395 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 BPIFB1Q8TDL5 484 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 GDPD5Q8WTR4 605 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 PIH1D2Q8WWB5 315 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 LPGAT1Q92604 370 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 SMARCD2Q92925 531 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ERP27Q96DN0 273 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 NSMCE3Q96MG7 304 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 LYSMD1Q96S90 227 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 NDNQ99608 321 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 OLFM1Q99784 485 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 TNKS2Q9H2K2 1166 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 NKX2-4Q9H2Z4 354 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 SUDS3Q9H7L9 328 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ZFYVE1Q9HBF4 777 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 THG1LQ9NWX6 298 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 DUS2Q9NX74 493 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 TAS2R13Q9NYV9 303 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 GDE1Q9NZC3 331 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 IL17CQ9P0M4 197 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 HECAQ9UBI9 543 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 FKBPLQ9UIM3 349 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ZFP69BQ9UJL9 534 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 CLEC4EQ9ULY5 219 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 ERVW-1Q9UQF0 538 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 RUVBL2Q9Y230 463 aaKnown RBP9.33□□□□□ -0.92
SMC1A-205ENST00000469129 PCDHB1Q9Y5F3 818 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 DOCK8Q8NF50 2099 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 PIKFYVEQ9Y2I7 2098 aa9.33□□□□□ -0.92
SMC1A-205ENST00000469129 C1orf232A0A0U1RR37 186 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CFAP73A6NFT4 308 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 H0YHG0 523 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 MYO1CO00159 1063 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 AURKAO14965 403 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 NPHS1O60500 1241 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DNAJC6O75061 913 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DNAJC8O75937 253 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 RHOBTB1O94844 696 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 UBOX5O94941 541 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ESR1P03372 595 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DLDP09622 509 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CCDC166P0CW27 439 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CYP2A6P11509 494 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ZNF37AP17032 561 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ATP5F1P24539 256 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SLC8A1P32418 973 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SPAM1P38567 509 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 PTGER3P43115 390 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SCTRP47872 440 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 GLRBP48167 497 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 STK19P49842 368 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CCNHP51946 323 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ADARP55265 1226 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DNAJB13P59910 316 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ATP6V0D1P61421 351 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 NAA20P61599 178 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ST8SIA6P61647 398 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 PFKPQ01813 784 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ZBTB16Q05516 673 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ACTN3Q08043 901 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SF3A3Q12874 501 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 RCN2Q14257 317 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CSHL1Q14406 222 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SEMA3AQ14563 771 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms