RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TMEM80Q96HE8 168 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MAGEB10Q96LZ2 347 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 GLT1D1Q96MS3 346 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 FAM111AQ96PZ2 611 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PKP2Q99959 881 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CCDC32Q9BV29 185 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ADI1Q9BV57 179 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 VPS33BQ9H267 617 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ADNPQ9H2P0 1102 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PPA2Q9H2U2 334 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 COQ10BQ9H8M1 238 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 LIN28AQ9H9Z2 209 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SIX2Q9NPC8 291 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 HPS4Q9NQG7 708 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 IARS2Q9NSE4 1012 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 DDX28Q9NUL7 540 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PPP1R14DQ9NXH3 145 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 OBP2AQ9NY56 170 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PTTG3PQ9NZH4 202 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PGAP2Q9UHJ9 254 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MOSPD1Q9UJG1 213 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 BAG5Q9UL15 447 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CDC14AQ9UNH5 594 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 AP3M1Q9Y2T2 418 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 RBMX2Q9Y388 322 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 RWDD3Q9Y3V2 267 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 TCAF1Q9Y4C2 921 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PCDHGB1Q9Y5G3 927 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SNX5Q9Y5X3 404 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 RAD54BQ9Y620 910 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SNCAIPQ9Y6H5 919 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CNTNAP1P78357 1384 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 COL1A1P02452 1464 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF142P52746 1687 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PKD1L3Q7Z443 1732 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CEP350Q5VT06 3117 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 DOCK2Q92608 1830 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 AKAP11Q9UKA4 1901 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 A0A0B4J269 797 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 A0A1W2PRG6 482 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TCRBV3S1A0A5B6 114 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 LINC00862A6NCI5 91 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 HMX3A6NHT5 357 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 C2orf81A6NN90 581 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 VSTM5A8MXK1 200 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 KPNA7A9QM74 516 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 J3QRK9 145 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 NOP56O00567 594 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ACOT8O14734 319 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TFECO14948 347 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CLDN3O15551 220 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 NMT2O60551 498 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 AVILO75366 819 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PRKD3O94806 890 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SEC24DO94855 1032 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CDK14O94921 469 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 MFN2O95140 757 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 LYPLA2O95372 231 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 IFNA14P01570 189 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CEACAM5P06731 702 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 GPIP06744 558 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FGFR1P11362 822 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF182P17025 639 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ITGA2P17301 1181 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CYP3A5P20815 502 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FASP25445 335 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 LRPAP1P30533 357 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 RCVRNP35243 200 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SERPINB5P36952 375 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ARL1P40616 181 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 HADHAP40939 763 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 OPRL1P41146 370 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TECP42680 631 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 NSFP46459 744 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SLC1A6P48664 564 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FMO5P49326 533 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ALDH7A1P49419 539 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 RAD23AP54725 363 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 MFAP3P55082 362 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 EIF3EP60228 445 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 MRPS22P82650 360 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 OTUD4Q01804 1114 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TAP1Q03518 808 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PRKCDQ05655 676 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF33BQ06732 778 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 KLF10Q13118 480 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SLC39A6Q13433 755 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 IL18R1Q13478 541 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PICALMQ13492 652 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TUBB3Q13509 450 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CAMK1Q14012 370 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 GNA13Q14344 377 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PPP2R5DQ14738 602 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 STARD3Q14849 445 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TAB1Q15750 504 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 HLFQ16534 295 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 INAVAQ3KP66 663 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 RUNDC3AQ59EK9 446 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 RALGPS1Q5JS13 557 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 BRMS1LQ5PSV4 323 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms