RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ZNF765Q7L2R6 523 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 PLA2G15Q8NCC3 412 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 EID2BQ96D98 161 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 NUS1Q96E22 293 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 NAP1L3Q99457 506 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-206ENST00000467681 ZFYVE1Q9HBF4 777 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 ARNT2Q9HBZ2 717 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 SHOC2Q9UQ13 582 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 SPO11Q9Y5K1 396 aa13.6□□□□□ -0.23
SSBP1-206ENST00000467681 LRRK1Q38SD2 2015 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 TDRD6O60522 2096 aaKnown RBP13.59□□□□□ -0.23
SSBP1-206ENST00000467681 ZNF185O15231 689 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 YKT6O15498 198 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 PCCBP05166 539 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 FGF1P05230 155 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 PIRTP0C851 137 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 KCNJ1P48048 391 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 CCT8P50990 548 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 THOP1P52888 689 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 EIF2B5Q13144 721 aaKnown RBP13.59□□□□□ -0.23
SSBP1-206ENST00000467681 SPARCL1Q14515 664 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 DENND5AQ6IQ26 1287 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 ESRP1Q6NXG1 681 aaKnown RBP13.59□□□□□ -0.23
SSBP1-206ENST00000467681 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 PIP4P1Q86T03 277 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 PELI3Q8N2H9 469 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 C17orf53Q8N3J3 647 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-206ENST00000467681 ATL2Q8NHH9 583 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 SAP25Q8TEE9 199 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 SCAMP4Q969E2 229 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
SSBP1-206ENST00000467681 AP2M1Q96CW1 435 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 NAPGQ99747 312 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-206ENST00000467681 FICDQ9BVA6 458 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 FSD1LQ9BXM9 530 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 GPR63Q9BZJ6 419 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 FAM83DQ9H4H8 585 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 TRABDQ9H4I3 376 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 ETNK1Q9HBU6 452 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 HACD3Q9P035 362 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 ZNF711Q9Y462 761 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 OR1A2Q9Y585 309 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 WDR87Q6ZQQ6 2873 aa13.59□□□□□ -0.23
SSBP1-206ENST00000467681 DCDC2BA2VCK2 349 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 CTAGE9A4FU28 777 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 GOLGA6CA6NDK9 693 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 GOLGA6BA6NDN3 693 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 K7ESM1 405 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 PDE2AO00408 941 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 AURKAO14965 403 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 SH3BP5O60239 455 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 CSF2P04141 144 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 GOLGA6DP0CG33 693 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 ETS1P14921 441 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 TSHRP16473 764 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 HTR1BP28222 390 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 RPL22P35268 128 aaKnown RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 ACTN2P35609 894 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 FDFT1P37268 417 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 ID4P47928 161 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 BNIP3Q12983 259 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 MSLNQ13421 630 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 NFATC4Q14934 902 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 CYP1B1Q16678 543 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 ZNF542PQ5EBM4 170 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 C4orf22Q6V702 233 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 PRUNE1Q86TP1 453 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 CCDC89Q8N998 374 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 GLIS1Q8NBF1 620 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 FUBP1Q96AE4 644 aaKnown RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 APOL2Q9BQE5 337 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 RIOK2Q9BVS4 552 aaKnown RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 AP1M1Q9BXS5 423 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 TEX101Q9BY14 249 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 CDH19Q9H159 772 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 RAD18Q9NS91 495 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 GOLGA6AQ9NYA3 693 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 SMARCAL1Q9NZC9 954 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 PKD2L2Q9NZM6 624 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 FEZ2Q9UHY8 353 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-206ENST00000467681 CD84Q9UIB8 345 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 KLF15Q9UIH9 416 aa13.58□□□□□ -0.24
SSBP1-206ENST00000467681 ERI2A8K979 691 aaKnown RBP13.57□□□□□ -0.24
SSBP1-206ENST00000467681 CACNB4O00305 520 aaPredicted RBP13.57□□□□□ -0.24
SSBP1-206ENST00000467681 PYGLP06737 847 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 ZSCAN5DPP0CG00 497 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 NME1P15531 152 aaKnown RBP13.57□□□□□ -0.24
SSBP1-206ENST00000467681 HMGCLP35914 325 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 GPR1P46091 355 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 KIAA1024LP59773 190 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 IL9RQ01113 521 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 OLIG2Q13516 323 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 FAXCQ5TGI0 409 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 ENPP7Q6UWV6 458 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 ADAMTSL4Q6UY14 1074 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 MACC1Q6ZN28 852 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 KANSL1Q7Z3B3 1105 aa13.57□□□□□ -0.24
SSBP1-206ENST00000467681 PARGQ86W56 976 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms