RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 RPS24P62847 133 aaKnown RBP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 BASP1P80723 227 aaKnown RBP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 CDK16Q00536 496 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 SERINC3Q13530 473 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 RABGAP1LQ5R372 815 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 FNBP1LQ5T0N5 605 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 FAXCQ5TGI0 409 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 KIAA1614Q5VZ46 1190 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 KCTD11Q693B1 232 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 ARHGEF18Q6ZSZ5 1173 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 CAND1Q86VP6 1230 aaKnown RBP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 CFAP52Q8N1V2 620 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 AGGF1Q8N302 714 aaeCLIP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 TAB3Q8N5C8 712 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 ATPAF2Q8N5M1 289 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 TEX26Q8N6G2 289 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 OR52K2Q8NGK3 314 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 TMA16Q96EY4 203 aaKnown RBP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 RBM15Q96T37 977 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 FERMT1Q9BQL6 677 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 ARHGAP9Q9BRR9 750 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 TMEM109Q9BVC6 243 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 DPH1Q9BZG8 443 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 GBA3Q9H227 469 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 EVA1BQ9NVM1 165 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 IPO11Q9UI26 975 aaKnown RBP11.09□□□□□ -0.63
PRPF3-203ENST00000467514 PLAAQ9Y263 795 aa11.09□□□□□ -0.63
PRPF3-203ENST00000467514 TBC1D3DA0A087WVF3 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3IA0A087WXS9 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3EA0A087X179 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3KA0A087X1G2 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 A0A1B0GVM2 712 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 GOLGA6BA6NDN3 693 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3FA6NER0 549 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TCAF2A6NFQ2 919 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 ARHGAP42A6NI28 874 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3LB9A6J9 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 FFAR2O15552 330 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 PRAMEF11O60813 436 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 RAMP2O60895 175 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 SUN1O94901 812 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 JCHAINP01591 159 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3HP0C7X1 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 CCNB1P14635 433 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 ACP1P24666 158 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 PSMB4P28070 264 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 ARL4CP56559 192 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 ERVPABLB-1P60509 514 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 ZNF844Q08AG5 666 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 FASTKD3Q14CZ7 662 aaKnown RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 SHBQ15464 509 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 CST6Q15828 149 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 HIF1AQ16665 826 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 C3orf38Q5JPI3 329 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TTC39BQ5VTQ0 682 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 RNF219Q5W0B1 726 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3GQ6DHY5 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3CQ6IPX1 549 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 CXorf57Q6NSI4 855 aaKnown RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 FOXR1Q6PIV2 292 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 SETD3Q86TU7 594 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 PRPF39Q86UA1 669 aaKnown RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 CCDC25Q86WR0 208 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 MMAAQ8IVH4 418 aaKnown RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 TBC1D3Q8IZP1 549 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 CCDC97Q96F63 343 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-203ENST00000467514 SERPINB12Q96P63 405 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 CEP41Q9BYV8 373 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 MAGEH1Q9H213 219 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 MTG2Q9H4K7 406 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 PDFQ9HBH1 243 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 SEPT10Q9P0V9 454 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 SERGEFQ9UGK8 458 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 IL17BQ9UHF5 180 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 OR51B4Q9Y5P0 310 aa11.08□□□□□ -0.64
PRPF3-203ENST00000467514 CHD5Q8TDI0 1954 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 PTPN13Q12923 2485 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 NYNRINQ9P2P1 1898 aaKnown RBP11.07□□□□□ -0.64
PRPF3-203ENST00000467514 ILVBLA1L0T0 632 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 GOLGA8MH3BSY2 632 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 J3KR12 359 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 SIGLEC6O43699 453 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 TBL1XO60907 577 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 SIN3BO75182 1162 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 CSO75390 466 aaKnown RBP11.07□□□□□ -0.64
PRPF3-203ENST00000467514 TCEA3O75764 348 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 SHBGP04278 402 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 NTRK1P04629 796 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 APRTP07741 180 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 ABHD2P08910 425 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 ALPPL2P10696 532 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 MLNP12872 115 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 TSHRP16473 764 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 NFKB1P19838 968 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 OR1E1P30953 314 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 MAT2AP31153 395 aaKnown RBP11.07□□□□□ -0.64
PRPF3-203ENST00000467514 ACVRL1P37023 503 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 GNA12Q03113 381 aa11.07□□□□□ -0.64
PRPF3-203ENST00000467514 IL10RBQ08334 325 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms