RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CA7P43166 264 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 SUOXP51687 545 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 EPHA4P54764 986 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 SNRPD1P62314 119 aaKnown RBP12.55□□□□□ -0.4
UBR4-210ENST00000466969 NFATC2Q13469 925 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 ATP1A4Q13733 1029 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 POLD3Q15054 466 aaPredicted RBP12.55□□□□□ -0.4
UBR4-210ENST00000466969 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 GFRALQ6UXV0 394 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 CLEC1AQ8NC01 280 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 OR7D4Q8NG98 312 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 OR2AP1Q8NGE2 309 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 MR1Q95460 341 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 ISG20Q96AZ6 181 aaKnown RBP12.55□□□□□ -0.4
UBR4-210ENST00000466969 SH3KBP1Q96B97 665 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 HMCESQ96FZ2 354 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 C9orf72Q96LT7 481 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 EPB41L1Q9H4G0 881 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 ATP13A1Q9HD20 1204 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 PCDHGC4Q9Y5F7 938 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 MXRA5Q9NR99 2828 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 SYNJ2BP-COX16A0A087WUM0 186 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 TEX33O43247 280 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 CREB3O43889 395 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 GABBR2O75899 941 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 TIAF1O95411 115 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 ESRRAP11474 423 aaPredicted RBP12.54□□□□□ -0.4
UBR4-210ENST00000466969 ERCC5P28715 1186 aaPredicted RBP12.54□□□□□ -0.4
UBR4-210ENST00000466969 GGCXP38435 758 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 LIG3P49916 1009 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 CASP6P55212 293 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 MTA1Q13330 715 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 MYLK3Q32MK0 819 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.54□□□□□ -0.4
UBR4-210ENST00000466969 IZUMO3Q5VZ72 239 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 PHC2Q8IXK0 858 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 CBARPQ8N350 705 aaPredicted RBP12.54□□□□□ -0.4
UBR4-210ENST00000466969 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 ZBTB2Q8N680 514 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 PPP4R1Q8TF05 950 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 SLC35F5Q8WV83 523 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 FAM204AQ9H8W3 233 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 COX16Q9P0S2 106 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 HS3ST4Q9Y661 456 aa12.54□□□□□ -0.4
UBR4-210ENST00000466969 PCDH17O14917 1159 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 TOX3O15405 576 aaPredicted RBP12.53□□□□□ -0.4
UBR4-210ENST00000466969 BUB1BO60566 1050 aaPredicted RBP12.53□□□□□ -0.4
UBR4-210ENST00000466969 RASSF9O75901 435 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 BMP15O95972 392 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 GSRP00390 522 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 IGLV3-25P01717 112 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 OR1E1P30953 314 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 TRIM23P36406 574 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 STAT6P42226 847 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 ARCN1P48444 511 aaKnown RBP12.53□□□□□ -0.4
UBR4-210ENST00000466969 ARF5P84085 180 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 ADORA2A-AS1P86434 159 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 RAD51Q06609 339 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 LONRF1Q17RB8 773 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.53□□□□□ -0.43e-6■■□□□ 13.7
UBR4-210ENST00000466969 ALFQ53S48 1182 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 B3GNTL1Q67FW5 361 aaPredicted RBP12.53□□□□□ -0.4
UBR4-210ENST00000466969 PWWP2BQ6NUJ5 590 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 ERAP2Q6P179 960 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 CCDC73Q6ZRK6 1079 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 BEND5Q7L4P6 421 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 SFRP1Q8N474 314 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 GOLGA5Q8TBA6 731 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 DNAJB14Q8TBM8 379 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 HSFY1Q96LI6 401 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 FER1L6-AS2Q96M78 137 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 FCRL4Q96PJ5 515 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.53□□□□□ -0.4
UBR4-210ENST00000466969 ZBTB20Q9HC78 741 aaPredicted RBP12.53□□□□□ -0.4
UBR4-210ENST00000466969 RARRES3Q9UL19 164 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 TCFL5Q9UL49 500 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 CSAG2Q9Y5P2 127 aa12.53□□□□□ -0.4
UBR4-210ENST00000466969 O00370 1275 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 RHOBTB3O94955 611 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 VDRP11473 427 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 MYCLP1P12525 358 aaPredicted RBP12.52□□□□□ -0.41
UBR4-210ENST00000466969 ADCY8P40145 1251 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 GFERP55789 205 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 PPP2R2BQ00005 443 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 ZNF169Q14929 603 aaPredicted RBP12.52□□□□□ -0.41
UBR4-210ENST00000466969 CDSNQ15517 529 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 C5orf22Q49AR2 442 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 PLEKHA7Q6IQ23 1121 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 TFAP2DQ7Z6R9 452 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 RAB43Q86YS6 212 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 ENDOVQ8N8Q3 282 aaKnown RBP12.52□□□□□ -0.41
UBR4-210ENST00000466969 CNDP1Q96KN2 507 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 ALPK1Q96QP1 1244 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 TMEM121Q9BTD3 319 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 SIK2Q9H0K1 926 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 POPDC2Q9HBU9 364 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms