RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 APOBEC3BQ9UH17 382 aaKnown RBP9.75□□□□□ -0.85
RTFDC1-205ENST00000466260 AMACRQ9UHK6 382 aa9.75□□□□□ -0.85
RTFDC1-205ENST00000466260 KLF15Q9UIH9 416 aa9.75□□□□□ -0.85
RTFDC1-205ENST00000466260 PNMA8BQ9ULN7 279 aaPredicted RBP9.75□□□□□ -0.85
RTFDC1-205ENST00000466260 PLXNB3Q9ULL4 1909 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 A0A0J9YYE9 177 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 CAPN8A6NHC0 703 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 APOC4-APOC2K7ER74 178 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 FZD6O60353 706 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 URI1O94763 535 aaPredicted RBP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 CLDN7O95471 211 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 TRBC1P01850 177 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 APOC2P02655 101 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 C1SP09871 688 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 HTR1BP28222 390 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 RBL1P28749 1068 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 PMLP29590 882 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 RXRGP48443 463 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 NR2C2P49116 596 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 EIF3EP60228 445 aaKnown RBP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 GNG11P61952 73 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 HNRNPKP61978 463 aaKnown RBP eCLIP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 YPEL5P62699 121 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 FOXK2Q01167 660 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 PPARDQ03181 441 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 MTM1Q13496 603 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 NFATC4Q14934 902 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 NOMO1Q15155 1222 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 DEFB133Q30KQ1 61 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 TEX44Q53QW1 395 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 ALG1LQ6GMV1 187 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 DOK6Q6PKX4 331 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 MACC1Q6ZN28 852 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 DBX2Q6ZNG2 339 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 Q6ZVL8 140 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 PID1Q7Z2X4 250 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 SLCO6A1Q86UG4 719 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 DCP2Q8IU60 420 aaKnown RBP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 REXO1L1PQ8IX06 675 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 ZNF567Q8N184 647 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 KRT222Q8N1A0 295 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 ZNF548Q8NEK5 533 aaPredicted RBP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 ACTL9Q8TC94 416 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 HTR3CQ8WXA8 447 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 FATE1Q969F0 183 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 IFT43Q96FT9 208 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 SCRN2Q96FV2 425 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 PDXPQ96GD0 296 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 CALR3Q96L12 384 aaKnown RBP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 QKIQ96PU8 341 aaKnown RBP eCLIP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 CDC6Q99741 560 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 SCNM1Q9BWG6 230 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 GLOD4Q9HC38 313 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 KLQ9UEF7 1012 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 KLK13Q9UKR3 277 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 ANGPTL2Q9UKU9 493 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 DOLKQ9UPQ8 538 aa9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 APOBEC2Q9Y235 224 aaKnown RBP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 ARID1BQ8NFD5 2236 aaPredicted RBP9.74□□□□□ -0.85
RTFDC1-205ENST00000466260 C1orf232A0A0U1RR37 186 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CTAGE9A4FU28 777 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 USP27XA6NNY8 438 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 MIF4GDA9UHW6 222 aaKnown RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CACNB4O00305 520 aaPredicted RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 TRIM38O00635 465 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 DDX3YO15523 660 aaKnown RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 KCNN4O15554 427 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 AQP9O43315 295 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 TNFSF14O43557 240 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 SIGLEC6O43699 453 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 RASGRP1O95267 797 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CSF2P04141 144 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 ALPPL2P10696 532 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 RBP3P10745 1247 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CTSEP14091 401 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 NME1P15531 152 aaKnown RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CES1P23141 567 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CD68P34810 354 aaPredicted RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 GPR1P46091 355 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 PEX5P50542 639 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 COPS2P61201 443 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 WASHC5Q12768 1159 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 GPS2Q13227 327 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 QPCTQ16769 361 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 SEL1L2Q5TEA6 688 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 KCTD16Q68DU8 428 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 ESRP1Q6NXG1 681 aaKnown RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 DARS2Q6PI48 645 aaKnown RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CRTC1Q6UUV9 634 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 DHRS13Q6UX07 377 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 KANSL1Q7Z3B3 1105 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 HEATR4Q86WZ0 1026 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 MARCH9Q86YJ5 346 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 CDKL3Q8IVW4 592 aaPredicted RBP9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 SLC25A45Q8N413 288 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 SLC25A41Q8N5S1 370 aa9.73□□□□□ -0.85
RTFDC1-205ENST00000466260 IPMKQ8NFU5 416 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms