RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 GPR27Q9NS67 375 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 GOLGA6AQ9NYA3 693 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 DLL3Q9NYJ7 618 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 TTC7AQ9ULT0 858 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-202ENST00000465601 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 OR1A2Q9Y585 309 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 SPO11Q9Y5K1 396 aa12.37□□□□□ -0.43
CHPF2-202ENST00000465601 SPTY2D1-AS1A0A0U1RR47 76 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 AURKAO14965 403 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 USP12O75317 370 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 SLC4A1P02730 911 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ZSCAN5DPP0CG00 497 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 HLA-DPA1P20036 260 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ADRA1AP35348 466 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ACTN2P35609 894 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ID4P47928 161 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 RXRGP48443 463 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 SPINT3P49223 89 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ARRB1P49407 418 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-202ENST00000465601 CCT8P50990 548 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 EIF2B5Q13144 721 aaKnown RBP12.36□□□□□ -0.43
CHPF2-202ENST00000465601 PUM1Q14671 1186 aaKnown RBP eCLIP12.36□□□□□ -0.43
CHPF2-202ENST00000465601 KCTD19Q17RG1 926 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-202ENST00000465601 P3H1Q32P28 736 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ESRP1Q6NXG1 681 aaKnown RBP12.36□□□□□ -0.43
CHPF2-202ENST00000465601 PNCKQ6P2M8 343 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 RANBP10Q6VN20 620 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 TMC3Q7Z5M5 1100 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 GATAD2AQ86YP4 633 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 OXR1Q8N573 874 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 CCDC89Q8N998 374 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 GLIS1Q8NBF1 620 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 SCAMP4Q969E2 229 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 AP2M1Q96CW1 435 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 NAPGQ99747 312 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-202ENST00000465601 GPR63Q9BZJ6 419 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ZFYVE1Q9HBF4 777 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 KCND1Q9NSA2 647 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 HOMER3Q9NSC5 361 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 KCTD5Q9NXV2 234 aa12.36□□□□□ -0.43
CHPF2-202ENST00000465601 ASXL3Q9C0F0 2248 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 CACNA1AO00555 2505 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PGRMC1O00264 195 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 TOR1BO14657 336 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 SH3BP5O60239 455 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 SDC3O75056 442 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 FGF1P05230 155 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 TCP1P17987 556 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 RPL22P35268 128 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 TRIM23P36406 574 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 GPR1P46091 355 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 SLC14A1Q13336 389 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PTK2BQ14289 1009 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 SUZ12Q15022 739 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PAPD7Q5XG87 772 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 KCTD11Q693B1 232 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 RAET1GQ6H3X3 334 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 ENPP7Q6UWV6 458 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 KLHDC8BQ8IXV7 354 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 NRSN1Q8IZ57 195 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PDCD7Q8N8D1 485 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 ACTRT1Q8TDG2 376 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 BLOC1S5Q8TDH9 187 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 SETD7Q8WTS6 366 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 MAGOHBQ96A72 148 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 FUBP1Q96AE4 644 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 CAMK1GQ96NX5 476 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PPP1R2P1Q96PQ5 205 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 SRPK1Q96SB4 655 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 NAP1L3Q99457 506 aaPredicted RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 AGAP2Q99490 1192 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 TBL1YQ9BQ87 522 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 RIOK2Q9BVS4 552 aaKnown RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 LGR4Q9BXB1 951 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 FAM83DQ9H4H8 585 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 ETNK1Q9HBU6 452 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 DNAJC28Q9NX36 388 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PKD2L2Q9NZM6 624 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PNMA8BQ9ULN7 279 aaPredicted RBP12.35□□□□□ -0.43
CHPF2-202ENST00000465601 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 SCN8AQ9UQD0 1980 aa12.35□□□□□ -0.43
CHPF2-202ENST00000465601 CTAGE9A4FU28 777 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 CACNB4O00305 520 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-202ENST00000465601 CES2O00748 559 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 FANCGO15287 622 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 PSMD3O43242 534 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 PCDHGA12O60330 932 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 TSHRP16473 764 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 JUNDP17535 347 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 HTR1BP28222 390 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 EPHA8P29322 1005 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-202ENST00000465601 FDFT1P37268 417 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 DPTQ07507 201 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 NFATC4Q14934 902 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 ALS2CLQ60I27 953 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms