RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 LILRA2Q8N149 483 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 OR4K2Q8NGD2 314 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 RMDN1Q96DB5 314 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 ZNF512Q96ME7 567 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 AARSD1Q9BTE6 412 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 ERVK-6Q9BXR3 956 aa18.68■□□□□ 0.58
TSPAN4-210ENST00000464987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 E7ENX8 843 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 ACOT8O14734 319 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 SCAMP3O14828 347 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 COCHO43405 550 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 TSPAN3O60637 253 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 PRLP01236 227 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 ALDOCP09972 364 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 FMO4P31512 558 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 SLC26A3P40879 764 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 ALDH1A3P47895 512 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 PTK2BQ14289 1009 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 RFTN1Q14699 578 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 PFKFB4Q16877 469 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 OGFRL1Q5TC84 451 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 REP15Q6BDI9 236 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 FBXL19Q6PCT2 694 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 LARP4Q71RC2 724 aaKnown RBP eCLIP18.67■□□□□ 0.588e-7■■■■■ 32.5
TSPAN4-210ENST00000464987 C16orf59Q7L2K0 433 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 CRIPAKQ8N1N5 446 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 FAR2Q96K12 515 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 KCNA7Q96RP8 456 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 CINPQ9BW66 212 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 TTLL2Q9BWV7 592 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 MAGEH1Q9H213 219 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 COPS7BQ9H9Q2 264 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 ADA2Q9NZK5 511 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 GALPQ9UBC7 116 aa18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 UBA2Q9UBT2 640 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-210ENST00000464987 PSMD12O00232 456 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 CDK14O94921 469 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 IRF1P10914 325 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 UQCRBP14927 111 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PMLP29590 882 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 OR1D2P34982 312 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 SUOXP51687 545 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 ZNF140P52738 457 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PSME3P61289 254 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PDAP1Q13442 181 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 LRP8Q14114 963 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 SQLEQ14534 574 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 ANKS3Q6ZW76 656 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 SCLYQ96I15 445 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 GCNAQ96QF7 691 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PSKH2Q96QS6 385 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 ATOH8Q96SQ7 321 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 TSEN34Q9BSV6 310 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 MRPL1Q9BYD6 325 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PCDHAC1Q9H158 963 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 CACNA2D2Q9NY47 1150 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PCDHGC4Q9Y5F7 938 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 DNAJC15Q9Y5T4 150 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 GPC4O75487 556 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 CR2P20023 1033 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PEX19P40855 299 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 NFKB2Q00653 900 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 TYSND1Q2T9J0 566 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 MMEL1Q495T6 779 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PAQR3Q6TCH7 311 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 LAYNQ6UX15 382 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 NPAS4Q8IUM7 802 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 AFAP1L2Q8N4X5 818 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 PEX13Q92968 403 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 ZNF599Q96NL3 588 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 RNF38Q9H0F5 515 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 SEPT3Q9UH03 358 aa18.66■□□□□ 0.58
TSPAN4-210ENST00000464987 ZNF840PA6NDX5 716 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 H7C4K7 107 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 CBX4O00257 560 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 INSIG1O15503 277 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 SMIM24O75264 130 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 SEC24AO95486 1093 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 KPNA1P52294 538 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 CDH4P55283 916 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 OXCT1P55809 520 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 NME5P56597 212 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 RALGDSQ12967 914 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 CYTH1Q15438 398 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 GLT6D1Q7Z4J2 308 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 C19orf60Q96EN9 201 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 SLC30A3Q99726 388 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 VN1R3Q9BXE9 311 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 PIDD1Q9HB75 910 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 MID1IP1Q9NPA3 183 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 NLE1Q9NVX2 485 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 RIMS3Q9UJD0 308 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 FNDC3AQ9Y2H6 1198 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 KDELR3O43731 214 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 BCAS2O75934 225 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 STC2O76061 302 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 VCLP18206 1134 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 OGNP20774 298 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 CORO1AP31146 461 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 BTG3Q14201 252 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms