RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 A0A0U1RQJ8 604 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ANO9A1A5B4 782 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 SLC38A8A6NNN8 435 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PIRO00625 290 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 DCLK1O15075 740 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PCDHGA12O60330 932 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 B3GAT3O94766 335 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 KCNE1P15382 129 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TNNI1P19237 187 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 CDK11BP21127 795 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TKTP29401 623 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ELF1P32519 619 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 CLCNKBP51801 687 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ADKP55263 362 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 CDH8P55286 799 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ROR1Q01973 937 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 CREB5Q02930 508 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF169Q14929 603 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM132DQ14C87 1099 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PON2Q15165 354 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ELF2Q15723 593 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 UPP1Q16831 310 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ERCC6LQ2NKX8 1250 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 COL28A1Q2UY09 1125 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 INAVAQ3KP66 663 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ARHGAP29Q52LW3 1261 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 C9orf57Q5W0N0 161 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 SP5Q6BEB4 398 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ARMC6Q6NXE6 501 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TRIM65Q6PJ69 517 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 INTS8Q75QN2 995 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ARID3BQ8IVW6 561 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 BOLLQ8N9W6 283 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 C1orf162Q8NEQ5 155 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 DEFB124Q8NES8 71 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 VOPP1Q96AW1 172 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF830Q96NB3 372 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 ERGIC2Q96RQ1 377 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 MRPL45Q9BRJ2 306 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 NAA15Q9BXJ9 866 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 GTPBP4Q9BZE4 634 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TRIM6Q9C030 488 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 C11orf54Q9H0W9 315 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 METTL14Q9HCE5 456 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM8AQ9HCN3 771 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 NLRC4Q9NPP4 1024 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM74BQ9NUR3 256 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 DPP3Q9NY33 737 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 GTSE1Q9NYZ3 720 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 FAM30AQ9NZY2 134 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 GCNT4Q9P109 453 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TLK1Q9UKI8 766 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 SLC45A2Q9UMX9 530 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 SLC8A2Q9UPR5 921 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 COQ4Q9Y3A0 265 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PCDHGA9Q9Y5G4 932 aaKnown RBP3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PCDHGA8Q9Y5G5 932 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PCDHGA7Q9Y5G6 932 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PCDHGA6Q9Y5G7 932 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PCDHGA3Q9Y5H0 932 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 INSL5Q9Y5Q6 135 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TNFRSF18Q9Y5U5 241 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TSC2P49815 1807 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 LAMA5O15230 3695 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 TRIP11Q15643 1979 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 PCNX2A6NKB5 2137 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 CACNA1EQ15878 2313 aa3.78□□□□□ -1.8
SCFD1-204ENST00000463622 SPAARA0A1B0GVQ0 90 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 PRRG1O14668 218 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 SYN3O14994 580 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 TRAPPC3O43617 180 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 AGFG2O95081 481 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 GNA14O95837 355 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 LDHAP00338 332 aaKnown RBP3.78□□□□□ -1.81
SCFD1-204ENST00000463622 ASS1P00966 412 aaKnown RBP3.78□□□□□ -1.81
SCFD1-204ENST00000463622 PLEKP08567 350 aaPredicted RBP3.78□□□□□ -1.81
SCFD1-204ENST00000463622 KRT19P08727 400 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 TMEM191BP0C7N4 346 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 MYBL2P10244 700 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 KRT13P13646 458 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 GJA1P17302 382 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 CYP3A5P20815 502 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 SCP2P22307 547 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 LRPAP1P30533 357 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 CASP14P31944 242 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 PIK3CAP42336 1068 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 VAV2P52735 878 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 POLR2FP61218 127 aaKnown RBP3.78□□□□□ -1.81
SCFD1-204ENST00000463622 NOP14P78316 857 aaKnown RBP3.78□□□□□ -1.81
SCFD1-204ENST00000463622 KRTAP1-1Q07627 177 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 BIRC3Q13489 604 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 MTF1Q14872 753 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 TEAD2Q15562 447 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 ITPRIPL2Q3MIP1 535 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 C3orf36Q3SXR2 165 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 KLHDC7AQ5VTJ3 777 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 PMS2CLQ68D20 193 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 KRT39Q6A163 491 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 WDR59Q6PJI9 974 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 CCNI2Q6ZMN8 369 aaPredicted RBP3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms