RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ZNF765Q7L2R6 523 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 CLEC14AQ86T13 490 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 TSPAN33Q86UF1 283 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 VSTM4Q8IW00 320 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 FAM46DQ8NEK8 389 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 HDAC11Q96DB2 347 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 SCARF2Q96GP6 870 aaPredicted RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 BBC3Q96PG8 261 aaPredicted RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 UBL7Q96S82 380 aaPredicted RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 LYSMD1Q96S90 227 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 TDRD1Q9BXT4 1180 aaKnown RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 DPH1Q9BZG8 443 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 RBM22Q9NW64 420 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 DNPEPQ9ULA0 475 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 RPL26L1Q9UNX3 145 aaKnown RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 SLC17A4Q9Y2C5 497 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 FASNP49327 2511 aaKnown RBP20.52■□□□□ 0.87
PDLIM4-205ENST00000463615 LOC400499M0QZD8 3231 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 SMG1Q96Q15 3661 aaKnown RBP20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 NUDT21O43809 227 aaKnown RBP20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 FUCA1P04066 466 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 CCNB1P14635 433 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 KDELR1P24390 212 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 RBMS1P29558 406 aaKnown RBP20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 CCKBRP32239 447 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 ARHGAP25P42331 645 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 CCDC173Q0VFZ6 552 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 C14orf28Q4W4Y0 310 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 C3orf38Q5JPI3 329 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 ADAMTSL4Q6UY14 1074 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 LSM14AQ8ND56 463 aaKnown RBP20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 RNF157Q96PX1 679 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 GFM1Q96RP9 751 aaKnown RBP20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 LGMNQ99538 433 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 LRRN3Q9H3W5 708 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 ABHD10Q9NUJ1 306 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 ZNHIT6Q9NWK9 470 aaKnown RBP20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 DTLQ9NZJ0 730 aa20.51■□□□□ 0.87
PDLIM4-205ENST00000463615 SOD1P00441 154 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 PRLP01236 227 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 PYGLP06737 847 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 IVLP07476 585 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 CA4P22748 312 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 UCNP55089 124 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 CCL7P80098 99 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 PTSQ03393 145 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 GBE1Q04446 702 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 SLC10A2Q12908 348 aaPredicted RBP20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 TCEAL1Q15170 157 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 LRRC66Q68CR7 880 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 NRROSQ86YC3 692 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 ARL14Q8N4G2 192 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 CCL4L1Q8NHW4 92 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 KIAA1524Q8TCG1 905 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 GSDMCQ9BYG8 508 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 ABCG8Q9H221 673 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 DEF6Q9H4E7 631 aa20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 CARS2Q9HA77 564 aaKnown RBP20.5■□□□□ 0.87
PDLIM4-205ENST00000463615 CAPN8A6NHC0 703 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 TK2O00142 265 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 AKR1B10O60218 316 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 MFAP3LO75121 409 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 RPLP0P05388 317 aaKnown RBP20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 ITGA2BP08514 1039 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 CTPS1P17812 591 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 GJC1P36383 396 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 STC1P52823 247 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 DSC2Q02487 901 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 PPIDQ08752 370 aaKnown RBP20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 ITKQ08881 620 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 NR1D2Q14995 579 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 PTPRRQ15256 657 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 TCEA2Q15560 299 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 LRRC38Q5VT99 294 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 DENND2CQ68D51 928 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 ZNF438Q7Z4V0 828 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 CCNJLQ8IV13 435 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 RHOT2Q8IXI1 618 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 CCDC13Q8IYE1 715 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 NRSN1Q8IZ57 195 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 SLC35G2Q8TBE7 412 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 SNRNP27Q8WVK2 155 aaKnown RBP20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 KCNE4Q8WWG9 221 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 RAPGEF5Q92565 580 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 CCDC97Q96F63 343 aaPredicted RBP20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 TMEM74Q96NL1 305 aa20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 FCRL3Q96P31 734 aaPredicted RBP20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 ARHGEF17Q96PE2 2063 aaPredicted RBP20.49■□□□□ 0.87
PDLIM4-205ENST00000463615 KIF26BQ2KJY2 2108 aa20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 BPTFQ12830 3046 aa20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 TEX51A0A1B0GUA7 166 aa20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 C3orf70A6NLC5 250 aaPredicted RBP20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 HLA-DQB2P05538 268 aa20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 TPM1P09493 284 aa20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 IFI35P80217 286 aaPredicted RBP20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 ZFP36L1Q07352 338 aaKnown RBP20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 NIPAL4Q0D2K0 466 aa20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 ILF3Q12906 894 aaKnown RBP eCLIP20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 PEX6Q13608 980 aa20.48■□□□□ 0.87
PDLIM4-205ENST00000463615 CLPPQ16740 277 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms