RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TMEM202A6NGA9 273 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 AURKAO14965 403 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 SDC3O75056 442 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 PSMB4P28070 264 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 TEAD1P28347 426 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 CXCR5P32302 372 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 GRK6P43250 576 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 KIAA1024LP59773 190 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 MPP3Q13368 585 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 MSLNQ13421 630 aaPredicted RBP17.66■□□□□ 0.42
VPS52-214ENST00000463486 NFATC4Q14934 902 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 SIRPB2Q5JXA9 342 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 RANBP10Q6VN20 620 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 LYSMD3Q7Z3D4 306 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 TMC3Q7Z5M5 1100 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 GLRX5Q86SX6 157 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 SETD7Q8WTS6 366 aaKnown RBP17.66■□□□□ 0.42
VPS52-214ENST00000463486 AGAP2Q99490 1192 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 TEX101Q9BY14 249 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 FRMD8P1Q9BZ68 369 aaPredicted RBP17.66■□□□□ 0.42
VPS52-214ENST00000463486 DNAJC28Q9NX36 388 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 CD84Q9UIB8 345 aa17.66■□□□□ 0.42
VPS52-214ENST00000463486 C1orf232A0A0U1RR37 186 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 SPAARA0A1B0GVQ0 90 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 ZNF189O75820 626 aaPredicted RBP17.65■□□□□ 0.42
VPS52-214ENST00000463486 METTL18O95568 372 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 AGTP01019 485 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 FUCA1P04066 466 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 SPINT3P49223 89 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 THOP1P52888 689 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 OLIG2Q13516 323 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 PTK2BQ14289 1009 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 TRIP6Q15654 476 aaKnown RBP17.65■□□□□ 0.42
VPS52-214ENST00000463486 SLC1A5Q15758 541 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 CCNG2Q16589 344 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 ALG11Q2TAA5 492 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 N4BP2L1Q5TBK1 243 aaPredicted RBP17.65■□□□□ 0.42
VPS52-214ENST00000463486 KCTD11Q693B1 232 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 ITPRIPL1Q6GPH6 555 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 DENND5AQ6IQ26 1287 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 NRSN1Q8IZ57 195 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 SLC35F6Q8N357 371 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 IPMKQ8NFU5 416 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 RHBDD1Q8TEB9 315 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 SLC32A1Q9H598 525 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 TOR4AQ9NXH8 423 aa17.65■□□□□ 0.42
VPS52-214ENST00000463486 TDRD6O60522 2096 aaKnown RBP17.64■□□□□ 0.41
VPS52-214ENST00000463486 MED19A0JLT2 244 aaPredicted RBP17.64■□□□□ 0.41
VPS52-214ENST00000463486 TRIM38O00635 465 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 ANXA9O76027 345 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 FGGP02679 453 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 ATP1A1P05023 1023 aaKnown RBP17.64■□□□□ 0.41
VPS52-214ENST00000463486 ITGAVP06756 1048 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 TSHRP16473 764 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 PARP6Q2NL67 630 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 ZNF569Q5MCW4 686 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 DRICH1Q6PGQ1 229 aaPredicted RBP17.64■□□□□ 0.41
VPS52-214ENST00000463486 ADAMTSL4Q6UY14 1074 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 RBFAQ8N0V3 343 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 RASGEF1CQ8N431 466 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 TTC30BQ8N4P2 665 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 AP2M1Q96CW1 435 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 RIOK2Q9BVS4 552 aaKnown RBP17.64■□□□□ 0.41
VPS52-214ENST00000463486 ZFYVE1Q9HBF4 777 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 FGF22Q9HCT0 170 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 CNOT6Q9ULM6 557 aaKnown RBP17.64■□□□□ 0.41
VPS52-214ENST00000463486 SHOC2Q9UQ13 582 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 ZNF711Q9Y462 761 aa17.64■□□□□ 0.41
VPS52-214ENST00000463486 COL5A1P20908 1838 aaPredicted RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 LRP4O75096 1905 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 RGSL1A5PLK6 1076 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 CEP104O60308 925 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 STK10O94804 968 aaKnown RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 DKK1O94907 266 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 JUNDP17535 347 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 STIP1P31948 543 aaKnown RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 GEMP55040 296 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 HNRNPKP61978 463 aaKnown RBP eCLIP17.63■□□□□ 0.41
VPS52-214ENST00000463486 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 HENMT1Q5T8I9 393 aaKnown RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 HEATR4Q86WZ0 1026 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 EID2Q8N6I1 236 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 PRELID2Q8N945 189 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 GLIS1Q8NBF1 620 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 GPR26Q8NDV2 337 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 ZNF548Q8NEK5 533 aaPredicted RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 PTCD2Q8WV60 388 aaKnown RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 OR1E3Q8WZA6 343 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 TSACCQ96A04 125 aaPredicted RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 TBATAQ96M53 351 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 WDR92Q96MX6 357 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 FERMT1Q9BQL6 677 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 CLPBQ9H078 707 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 WDR26Q9H7D7 661 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 TTC7AQ9ULT0 858 aaPredicted RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 WASF3Q9UPY6 502 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 DRG1Q9Y295 367 aaKnown RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 AAR2Q9Y312 384 aaKnown RBP17.63■□□□□ 0.41
VPS52-214ENST00000463486 DGKBQ9Y6T7 804 aa17.63■□□□□ 0.41
VPS52-214ENST00000463486 BPTFQ12830 3046 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms