RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 NHEJ1Q9H9Q4 299 aaPredicted RBP11.9□□□□□ -0.5
RTCB-202ENST00000463455 GPR34Q9UPC5 381 aa11.9□□□□□ -0.5
RTCB-202ENST00000463455 PCDHGA8Q9Y5G5 932 aa11.9□□□□□ -0.5
RTCB-202ENST00000463455 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
RTCB-202ENST00000463455 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
RTCB-202ENST00000463455 A0A0J9YYE9 177 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 PRSS38A1L453 326 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 TMEM202A6NGA9 273 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 NPIPB15A6NHN6 443 aaPredicted RBP11.89□□□□□ -0.51
RTCB-202ENST00000463455 NTN3O00634 580 aaPredicted RBP11.89□□□□□ -0.51
RTCB-202ENST00000463455 USP12O75317 370 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 TRBC1P01850 177 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 CCNB1P14635 433 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 GJC1P36383 396 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 SPIDRQ14159 915 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 COL28A1Q2UY09 1125 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 PERM1Q5SV97 790 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 SLC9A4Q6AI14 798 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 TECPR1Q7Z6L1 1165 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 PDZD3Q86UT5 571 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 GPR156Q8NFN8 814 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 OR1E3Q8WZA6 343 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 LIN37Q96GY3 246 aaPredicted RBP11.89□□□□□ -0.51
RTCB-202ENST00000463455 CCDC3Q9BQI4 270 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 TDRD1Q9BXT4 1180 aaKnown RBP11.89□□□□□ -0.51
RTCB-202ENST00000463455 FGF22Q9HCT0 170 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 THSD1Q9NS62 852 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 RBM22Q9NW64 420 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■□□□ 13.7
RTCB-202ENST00000463455 TRNAU1APQ9NX07 287 aaKnown RBP11.89□□□□□ -0.51
RTCB-202ENST00000463455 DTLQ9NZJ0 730 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 PTPRQQ9UMZ3 2332 aa11.89□□□□□ -0.51
RTCB-202ENST00000463455 TTC24A2A3L6 582 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 CAPN8A6NHC0 703 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 TLX3O43711 291 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 CELA2BP08218 269 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 MYF5P13349 255 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 GLB1P16278 677 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 ETV3P41162 512 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 EPHB1P54762 984 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 HADHBP55084 474 aaKnown RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 PCBP4P57723 403 aaKnown RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 GABREP78334 506 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 IFI35P80217 286 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 CDK3Q00526 305 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 GBE1Q04446 702 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 PPIDQ08752 370 aaKnown RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 ITKQ08881 620 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 TBX2Q13207 712 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 EIF3IQ13347 325 aaKnown RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 MESDQ14696 234 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 SLC14A2Q15849 920 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 CLPPQ16740 277 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 ZFYVE27Q5T4F4 411 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 ADAMTSL4Q6UY14 1074 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 RD3Q7Z3Z2 195 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 HSD11B1LQ7Z5J1 315 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 CCDC13Q8IYE1 715 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 NRSN1Q8IZ57 195 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 PLD5Q8N7P1 536 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 KYQ8NBH2 561 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 ZNF248Q8NDW4 579 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 ARRDC2Q8TBH0 407 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 HNRNPLLQ8WVV9 542 aaKnown RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 SCARF2Q96GP6 870 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 HIC2Q96JB3 615 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 CHP1Q99653 195 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 FRMD8Q9BZ67 464 aaPredicted RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
RTCB-202ENST00000463455 SLC17A4Q9Y2C5 497 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 ENTPD2Q9Y5L3 495 aa11.88□□□□□ -0.51
RTCB-202ENST00000463455 CELSR3Q9NYQ7 3312 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 LRRD1A4D1F6 860 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 RGSL1A5PLK6 1076 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 C3orf70A6NLC5 250 aaPredicted RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 APOL1O14791 398 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 PPP1R12AO14974 1030 aaPredicted RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 ZW10O43264 779 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 NUDT21O43809 227 aaKnown RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 HLA-DQB2P05538 268 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 IVLP07476 585 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 PDHA1P08559 390 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 NR2C2P49116 596 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 STC1P52823 247 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 ILF3Q12906 894 aaKnown RBP eCLIP11.87□□□□□ -0.51
RTCB-202ENST00000463455 SLC10A2Q12908 348 aaPredicted RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 PDK1Q15118 436 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 CERCAMQ5T4B2 595 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 LRRC66Q68CR7 880 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 RAET1GQ6H3X3 334 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 C19orf48Q6RUI8 117 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 Q6ZVL8 140 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms