RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SSU72P8A0A1W2PR75 194 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 EME2A4GXA9 379 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 NEDD8-MDP1E9PL57 170 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 AGPSO00116 658 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 PDE2AO00408 941 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 MDM4O15151 490 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TIMM44O43615 452 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 SIGLEC6O43699 453 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 CACNG3O60359 315 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TBX18O95935 607 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 B3GALT4O96024 378 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 GLI1P08151 1106 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 HMBSP08397 361 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 MSL3P1P0C860 447 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 FAM228BP0C875 321 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 MYBL1P10243 752 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 IRF1P10914 325 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TYRP14679 529 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 CD38P28907 300 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 EPHA8P29322 1005 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 CASRP41180 1078 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 RXRGP48443 463 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 FNTAP49354 379 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 DGKGP49619 791 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 DUSP3P51452 185 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 IRAK1P51617 712 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 NEK2P51955 445 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 ENPP2Q13822 863 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TAF5Q15542 800 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC18A3Q16572 532 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 DCAF6Q58WW2 860 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 C3orf38Q5JPI3 329 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 EFHC2Q5JST6 749 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 ZNF569Q5MCW4 686 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 CCDC122Q5T0U0 273 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 SYPL2Q5VXT5 272 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 DNAJC24Q6P3W2 148 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 ALKBH5Q6P6C2 394 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 FIGNL1Q6PIW4 674 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 OLFML1Q6UWY5 402 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 C6orf15Q6UXA7 325 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TPGS1Q6ZTW0 290 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 MON1BQ7L1V2 547 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC26A9Q7LBE3 791 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 BHLHA9Q7RTU4 235 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 JAMLQ86YT9 394 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TICAM1Q8IUC6 712 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 MCOLN2Q8IZK6 566 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 DEFB106AQ8N104 65 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 ZNF564Q8TBZ8 553 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 WBP2Q969T9 261 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 MFSD3Q96ES6 412 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TRIM11Q96F44 468 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 PRR11Q96HE9 360 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 PIWIL1Q96J94 861 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC6A18Q96N87 628 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TSC22D3Q99576 134 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 CHP1Q99653 195 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 BBS2Q9BXC9 721 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 BTBD1Q9H0C5 482 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 ABCG4Q9H172 646 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 MUC3BQ9H195 1237 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 RETREG1Q9H6L5 497 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 NHEJ1Q9H9Q4 299 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 POPDC2Q9HBU9 364 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 GDF3Q9NR23 364 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 PAPOLBQ9NRJ5 636 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 PARVAQ9NVD7 372 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 ASNSD1Q9NWL6 643 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 TAS2R14Q9NYV8 317 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 THAP10Q9P2Z0 257 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 SFMBT1Q9UHJ3 866 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 LSM7Q9UK45 103 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 ATXN7L1Q9ULK2 861 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 PAIP2BQ9ULR5 123 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 PCDHB14Q9Y5E9 798 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 CAPN7Q9Y6W3 813 aa6.07□□□□□ -1.44
SMARCC1-204ENST00000462198 SYNJ2BP-COX16A0A087WUM0 186 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 A0A1W2PPC4 97 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC12A8A0AV02 714 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 CDRT15L2A8MXV6 281 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 M0QYT0 321 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 TLR4O00206 839 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 TRIM38O00635 465 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 NPC1O15118 1278 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 MSI1O43347 362 aaKnown RBP6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 PEX14O75381 377 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 DAB1O75553 588 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 RASSF9O75901 435 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 SMNDC1O75940 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 AGFG2O95081 481 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 BPNT1O95861 308 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 FYNP06241 537 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 IGHV4-34P06331 123 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 VIMP08670 466 aaKnown RBP6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 TROVE2P10155 538 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 KRT3P12035 628 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 RRM1P23921 792 aa6.06□□□□□ -1.44
SMARCC1-204ENST00000462198 ITGB7P26010 798 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms