RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 ZNF23P17027 643 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 ITGA2P17301 1181 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 RXRAP19793 462 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 AGAP20933 346 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 BDKRB2P30411 391 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 HOXC13P31276 330 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 METAP2P50579 478 aaKnown RBP eCLIP2.53□□□□□ -2
SYPL1-203ENST00000460770 LUMP51884 338 aaPredicted RBP2.53□□□□□ -2
SYPL1-203ENST00000460770 CHRNDQ07001 517 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 ARHGAP17Q68EM7 881 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 ATF7IPQ6VMQ6 1270 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 ZNF497Q6ZNH5 498 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 ADGRG6Q86SQ4 1221 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 TADA2BQ86TJ2 420 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 GPAT4Q86UL3 456 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 TMTC1Q8IUR5 882 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 SPPL3Q8TCT6 385 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 RND1Q92730 232 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 ZNF524Q96C55 264 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 LRR1Q96L50 414 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 ZNF599Q96NL3 588 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 QRFPRQ96P65 431 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 TWNKQ96RR1 684 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 MTERF1Q99551 399 aaKnown RBP2.53□□□□□ -2
SYPL1-203ENST00000460770 TRIM51Q9BSJ1 452 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 NUF2Q9BZD4 464 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 TAOK3Q9H2K8 898 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 MROH8Q9H579 483 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 MAGEE1Q9HCI5 957 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 MKKSQ9NPJ1 570 aaPredicted RBP2.53□□□□□ -2
SYPL1-203ENST00000460770 PEMTQ9UBM1 199 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 GRHPRQ9UBQ7 328 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 POLG2Q9UHN1 485 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 TINAGQ9UJW2 476 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 FBXO9Q9UK97 447 aaPredicted RBP2.53□□□□□ -2
SYPL1-203ENST00000460770 ERVK-11Q9UQG0 969 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 DLGAP4Q9Y2H0 992 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 FAM96BQ9Y3D0 163 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 TTC36A6NLP5 189 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 HHLA1C9JL84 531 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 CLIC2O15247 247 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 SYNGR3O43761 229 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 IGHV4-39P01824 125 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 MAOAP21397 527 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 HOXA13P31271 388 aaPredicted RBP2.52□□□□□ -2.01
SYPL1-203ENST00000460770 CLDN2P57739 230 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 BRD3Q15059 726 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 JMJD6Q6NYC1 403 aaPredicted RBP2.52□□□□□ -2.01
SYPL1-203ENST00000460770 ASB18Q6ZVZ8 466 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 KRTAP7-1Q8IUC3 87 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 STPG4Q8N801 248 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 MAPK1IP1LQ8NDC0 245 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 POF1BQ8WVV4 589 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 PIGTQ969N2 578 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 NEUROD6Q96NK8 337 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 NDST4Q9H3R1 872 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 GPR108Q9NPR9 543 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 SNTG1Q9NSN8 517 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 KIAA1456Q9P272 454 aa2.52□□□□□ -2.01
SYPL1-203ENST00000460770 ZNF624Q9P2J8 865 aaPredicted RBP2.52□□□□□ -2.01
SYPL1-203ENST00000460770 IGKV6D-41A0A0C4DH26 115 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 GOLGA6L10A0A0M3HER8 536 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 FAM90A7PA6NKC0 464 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 FAM90A22PA8MWA6 464 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 FAM90A12PA8MX19 464 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 FAM90A23PA8MXZ1 464 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 KLK10O43240 276 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 ZNHIT1O43257 154 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 ARHGEF9O43307 516 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 CNPP09543 421 aaKnown RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 PATE4P0C8F1 98 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 G6PDP11413 515 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 MYOD1P15172 320 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 POLR2CP19387 275 aaPredicted RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 EIF2S3P41091 472 aaKnown RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 GABRB2P47870 512 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 FASLGP48023 281 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 AMPHP49418 695 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 CSNK2A1P68400 391 aaPredicted RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 IRX1P78414 480 aaPredicted RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 FOXM1Q08050 763 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 PPP2R5BQ15173 497 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 SLC45A4Q5BKX6 768 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 TCTE1Q5JU00 501 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 ZNF704Q6ZNC4 412 aaPredicted RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 RRM2BQ7LG56 351 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 C2CD5Q86YS7 1000 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 FTSJ3Q8IY81 847 aaKnown RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 CSNK2A3Q8NEV1 391 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 WDR20Q8TBZ3 569 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 DUSP19Q8WTR2 217 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 DNAAF4Q8WXU2 420 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 CLSTN3Q9BQT9 956 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 DCTN5Q9BTE1 182 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 WDR13Q9H1Z4 485 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 PLEKHA4Q9H4M7 779 aa2.51□□□□□ -2.01
SYPL1-203ENST00000460770 TFB2MQ9H5Q4 396 aaKnown RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 ESRP2Q9H6T0 727 aaKnown RBP2.51□□□□□ -2.01
SYPL1-203ENST00000460770 ZDHHC18Q9NUE0 388 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms