RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ADGRF1Q5T601 910 aa15.05■□□□□ 0
LDLR-202ENST00000455727 LARP4Q71RC2 724 aaKnown RBP eCLIP15.05■□□□□ 03e-8■■□□□ 12.3
LDLR-202ENST00000455727 TMEM126BQ8IUX1 230 aa15.05■□□□□ 0
LDLR-202ENST00000455727 SPNS2Q8IVW8 549 aa15.05■□□□□ 0
LDLR-202ENST00000455727 CLYBLQ8N0X4 340 aa15.05■□□□□ 0
LDLR-202ENST00000455727 NSMCE3Q96MG7 304 aa15.05■□□□□ 0
LDLR-202ENST00000455727 TDRD1Q9BXT4 1180 aaKnown RBP15.05■□□□□ 0
LDLR-202ENST00000455727 CREBZFQ9NS37 354 aa15.05■□□□□ 0
LDLR-202ENST00000455727 TRPM5Q9NZQ8 1165 aa15.05■□□□□ 0
LDLR-202ENST00000455727 SCOCQ9UIL1 159 aa15.05■□□□□ 0
LDLR-202ENST00000455727 SPO11Q9Y5K1 396 aa15.05■□□□□ 0
LDLR-202ENST00000455727 ACTL7AQ9Y615 435 aa15.05■□□□□ 0
LDLR-202ENST00000455727 C2orf81A6NN90 581 aa15.05■□□□□ -0
LDLR-202ENST00000455727 GPC4O75487 556 aa15.05■□□□□ -0
LDLR-202ENST00000455727 PRLP01236 227 aa15.05■□□□□ -0
LDLR-202ENST00000455727 F11P03951 625 aa15.05■□□□□ -0
LDLR-202ENST00000455727 CORO1AP31146 461 aaKnown RBP15.05■□□□□ -0
LDLR-202ENST00000455727 SCNN1BP51168 640 aa15.05■□□□□ -0
LDLR-202ENST00000455727 RPL26P61254 145 aaKnown RBP15.05■□□□□ -0
LDLR-202ENST00000455727 PDAP1Q13442 181 aaKnown RBP15.05■□□□□ -0
LDLR-202ENST00000455727 CEACAM7Q14002 265 aa15.05■□□□□ -0
LDLR-202ENST00000455727 CYTH1Q15438 398 aa15.05■□□□□ -0
LDLR-202ENST00000455727 RPS27LQ71UM5 84 aaKnown RBP15.05■□□□□ -0
LDLR-202ENST00000455727 RAB44Q7Z6P3 723 aaPredicted RBP15.05■□□□□ -0
LDLR-202ENST00000455727 HIPK4Q8NE63 616 aa15.05■□□□□ -0
LDLR-202ENST00000455727 LPGAT1Q92604 370 aa15.05■□□□□ -0
LDLR-202ENST00000455727 ATOH8Q96SQ7 321 aa15.05■□□□□ -0
LDLR-202ENST00000455727 DDX50Q9BQ39 737 aaKnown RBP15.05■□□□□ -0
LDLR-202ENST00000455727 SCUBE2Q9NQ36 999 aa15.05■□□□□ -0
LDLR-202ENST00000455727 MRPL40Q9NQ50 206 aaKnown RBP15.05■□□□□ -0
LDLR-202ENST00000455727 SARDHQ9UL12 918 aa15.05■□□□□ -0
LDLR-202ENST00000455727 VPS9D1Q9Y2B5 631 aa15.05■□□□□ -0
LDLR-202ENST00000455727 FIS1Q9Y3D6 152 aa15.05■□□□□ -0
LDLR-202ENST00000455727 ANAPC1Q9H1A4 1944 aa15.04■□□□□ -0
LDLR-202ENST00000455727 TANC1Q9C0D5 1861 aa15.04■□□□□ -0
LDLR-202ENST00000455727 DPPA5A6NC42 116 aa15.04■□□□□ -0
LDLR-202ENST00000455727 PSMD12O00232 456 aaPredicted RBP15.04■□□□□ -0
LDLR-202ENST00000455727 ABLIM3O94929 683 aa15.04■□□□□ -0
LDLR-202ENST00000455727 CXCL10P02778 98 aa15.04■□□□□ -0
LDLR-202ENST00000455727 MTHFD2P13995 350 aa15.04■□□□□ -0
LDLR-202ENST00000455727 DPP6P42658 865 aa15.04■□□□□ -0
LDLR-202ENST00000455727 ACADVLP49748 655 aa15.04■□□□□ -0
LDLR-202ENST00000455727 FLOT2Q14254 428 aa15.04■□□□□ -0
LDLR-202ENST00000455727 UGT3A2Q3SY77 523 aa15.04■□□□□ -0
LDLR-202ENST00000455727 CYHR1Q6ZMK1 362 aa15.04■□□□□ -0
LDLR-202ENST00000455727 ZNF783Q6ZMS7 281 aa15.04■□□□□ -0
LDLR-202ENST00000455727 GLT6D1Q7Z4J2 308 aa15.04■□□□□ -0
LDLR-202ENST00000455727 HMGCLL1Q8TB92 370 aa15.04■□□□□ -0
LDLR-202ENST00000455727 GDPD5Q8WTR4 605 aa15.04■□□□□ -0
LDLR-202ENST00000455727 DLG3Q92796 817 aa15.04■□□□□ -0
LDLR-202ENST00000455727 KIAA1191Q96A73 305 aa15.04■□□□□ -0
LDLR-202ENST00000455727 RMDN1Q96DB5 314 aa15.04■□□□□ -0
LDLR-202ENST00000455727 DERL2Q9GZP9 239 aa15.04■□□□□ -0
LDLR-202ENST00000455727 TAS2R13Q9NYV9 303 aa15.04■□□□□ -0
LDLR-202ENST00000455727 HACD3Q9P035 362 aa15.04■□□□□ -0
LDLR-202ENST00000455727 AGO1Q9UL18 857 aaKnown RBP15.04■□□□□ -0
LDLR-202ENST00000455727 MTF2Q9Y483 593 aaPredicted RBP15.04■□□□□ -0
LDLR-202ENST00000455727 LCHNA4D1U4 455 aa15.04■□□□□ -0
LDLR-202ENST00000455727 BCAS2O75934 225 aaPredicted RBP15.04■□□□□ -0
LDLR-202ENST00000455727 XRCC1P18887 633 aaPredicted RBP15.04■□□□□ -0
LDLR-202ENST00000455727 CD9P21926 228 aa15.04■□□□□ -0
LDLR-202ENST00000455727 ATP6V0D1P61421 351 aa15.04■□□□□ -0
LDLR-202ENST00000455727 NAA20P61599 178 aa15.04■□□□□ -0
LDLR-202ENST00000455727 FASTKQ14296 549 aaKnown RBP15.04■□□□□ -0
LDLR-202ENST00000455727 OR4D1Q15615 310 aa15.04■□□□□ -0
LDLR-202ENST00000455727 DEFB115Q30KQ5 88 aa15.04■□□□□ -0
LDLR-202ENST00000455727 PQLC1Q8N2U9 271 aa15.04■□□□□ -0
LDLR-202ENST00000455727 PTGR2Q8N8N7 351 aaPredicted RBP15.04■□□□□ -0
LDLR-202ENST00000455727 MDGA1Q8NFP4 955 aa15.04■□□□□ -0
LDLR-202ENST00000455727 OR4K2Q8NGD2 314 aa15.04■□□□□ -0
LDLR-202ENST00000455727 ZNF461Q8TAF7 563 aa15.04■□□□□ -0
LDLR-202ENST00000455727 STAG3L4Q8TBR4 150 aa15.04■□□□□ -0
LDLR-202ENST00000455727 TRMT2BQ96GJ1 504 aaKnown RBP15.04■□□□□ -0
LDLR-202ENST00000455727 NPAS2Q99743 824 aa15.04■□□□□ -0
LDLR-202ENST00000455727 KLF16Q9BXK1 252 aaPredicted RBP15.04■□□□□ -0
LDLR-202ENST00000455727 STOML2Q9UJZ1 356 aa15.04■□□□□ -0
LDLR-202ENST00000455727 MICAL3Q7RTP6 2002 aa15.03■□□□□ -0
LDLR-202ENST00000455727 CCDC189A1A4V9 331 aa15.03■□□□□ -0
LDLR-202ENST00000455727 CFLARO15519 480 aa15.03■□□□□ -0
LDLR-202ENST00000455727 KERAO60938 352 aa15.03■□□□□ -0
LDLR-202ENST00000455727 PARNO95453 639 aaKnown RBP15.03■□□□□ -0
LDLR-202ENST00000455727 SEC24AO95486 1093 aa15.03■□□□□ -0
LDLR-202ENST00000455727 RPL17P18621 184 aaKnown RBP15.03■□□□□ -0
LDLR-202ENST00000455727 LPOP22079 712 aaPredicted RBP15.03■□□□□ -0
LDLR-202ENST00000455727 PPP3CCP48454 512 aa15.03■□□□□ -0
LDLR-202ENST00000455727 PRMT2P55345 433 aa15.03■□□□□ -0
LDLR-202ENST00000455727 SH3BP2P78314 561 aa15.03■□□□□ -0
LDLR-202ENST00000455727 LRP8Q14114 963 aa15.03■□□□□ -0
LDLR-202ENST00000455727 OGFRL1Q5TC84 451 aaPredicted RBP15.03■□□□□ -0
LDLR-202ENST00000455727 TPGS2Q68CL5 300 aa15.03■□□□□ -0
LDLR-202ENST00000455727 GK5Q6ZS86 529 aa15.03■□□□□ -0
LDLR-202ENST00000455727 MFN1Q8IWA4 741 aa15.03■□□□□ -0
LDLR-202ENST00000455727 SPDL1Q96EA4 605 aa15.03■□□□□ -0
LDLR-202ENST00000455727 C19orf60Q96EN9 201 aa15.03■□□□□ -0
LDLR-202ENST00000455727 CLSTN3Q9BQT9 956 aa15.03■□□□□ -0
LDLR-202ENST00000455727 VN1R3Q9BXE9 311 aa15.03■□□□□ -0
LDLR-202ENST00000455727 ADGRE3Q9BY15 652 aa15.03■□□□□ -0
LDLR-202ENST00000455727 CCDC68Q9H2F9 335 aa15.03■□□□□ -0
LDLR-202ENST00000455727 MED16Q9Y2X0 877 aa15.03■□□□□ -0
LDLR-202ENST00000455727 EIF4E1BA6NMX2 242 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms