RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 RPL26L1Q9UNX3 145 aaKnown RBP21.2■□□□□ 0.98
HMGB3-205ENST00000455596 GPR34Q9UPC5 381 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 ALG6Q9Y672 507 aa21.2■□□□□ 0.98
HMGB3-205ENST00000455596 A0A0A6YYK5 440 aaPredicted RBP21.19■□□□□ 0.98
HMGB3-205ENST00000455596 A0A0U1RQS6 177 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 PRLP01236 227 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 CD86P42081 329 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 CDK3Q00526 305 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 PTSQ03393 145 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 DPTQ07507 201 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 TAF8Q7Z7C8 310 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 CNTD1Q8N815 330 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 SMIM14Q96QK8 99 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 BRD8Q9H0E9 1235 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 PCDHB1Q9Y5F3 818 aa21.19■□□□□ 0.98
HMGB3-205ENST00000455596 WDFY3Q8IZQ1 3526 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 CSO75390 466 aaKnown RBP21.18■□□□□ 0.98
HMGB3-205ENST00000455596 MMP2P08253 660 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 CDKN2BP42772 138 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 GPR1P46091 355 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 SKOR1P84550 965 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 TFDP2Q14188 446 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 BZW1Q7L1Q6 419 aaKnown RBP21.18■□□□□ 0.98
HMGB3-205ENST00000455596 KYQ8NBH2 561 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 WDR48Q8TAF3 677 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 AP2M1Q96CW1 435 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 TMEM168Q9H0V1 697 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 ABCG8Q9H221 673 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 GOLPH3Q9H4A6 298 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 SEPT10Q9P0V9 454 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 CD84Q9UIB8 345 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 TFR2Q9UP52 801 aa21.18■□□□□ 0.98
HMGB3-205ENST00000455596 PYGLP06737 847 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 NR2C2P49116 596 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 STC1P52823 247 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 C11orf63Q6NUN7 778 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 SPOCD1Q6ZMY3 1216 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 ZNF765Q7L2R6 523 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 TMTC1Q8IUR5 882 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 RAVER1Q8IY67 606 aaKnown RBP21.17■□□□□ 0.98
HMGB3-205ENST00000455596 OR6C4Q8NGE1 309 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 LYSMD1Q96S90 227 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 CCDC3Q9BQI4 270 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 ADGRE3Q9BY15 652 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 CEP41Q9BYV8 373 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 FRMD8Q9BZ67 464 aaPredicted RBP21.17■□□□□ 0.98
HMGB3-205ENST00000455596 CARS2Q9HA77 564 aaKnown RBP21.17■□□□□ 0.98
HMGB3-205ENST00000455596 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.17■□□□□ 0.98
HMGB3-205ENST00000455596 GPSM3Q9Y4H4 160 aa21.17■□□□□ 0.98
HMGB3-205ENST00000455596 ACACAQ13085 2346 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 SOWAHDA6NJG2 315 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 ANKRD66B4E2M5 251 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 CST8O60676 142 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 TCEA3O75764 348 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 NDUFA10O95299 355 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 IPO7O95373 1038 aaKnown RBP21.16■□□□□ 0.98
HMGB3-205ENST00000455596 CLDN7O95471 211 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 CEACAM5P06731 702 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 TAZQ16635 292 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 ISXQ2M1V0 245 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 TFDP3Q5H9I0 405 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 KAZNQ674X7 775 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 RBM44Q6ZP01 1051 aaKnown RBP21.16■□□□□ 0.98
HMGB3-205ENST00000455596 RFLNAQ6ZTI6 216 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 NT5DC3Q86UY8 548 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 NLRP8Q86W28 1048 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 KATNAL2Q8IYT4 538 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 NRSN1Q8IZ57 195 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 FAM46DQ8NEK8 389 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 GPR156Q8NFN8 814 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 AGAP3Q96P47 875 aa21.16■□□□□ 0.98
HMGB3-205ENST00000455596 MLPHQ9BV36 600 aaPredicted RBP21.16■□□□□ 0.98
HMGB3-205ENST00000455596 EPN1Q9Y6I3 576 aaPredicted RBP21.16■□□□□ 0.98
HMGB3-205ENST00000455596 C1orf232A0A0U1RR37 186 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 BRINP1O60477 761 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 USP12O75317 370 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 ZRANB2O95218 330 aaKnown RBP eCLIP21.15■□□□□ 0.98
HMGB3-205ENST00000455596 SOD1P00441 154 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 FECHP22830 423 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 QPCTQ16769 361 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 OGFOD3Q6PK18 319 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 ADAMTSL4Q6UY14 1074 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 B4GALNT4Q76KP1 1039 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 DAAM2Q86T65 1068 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 RCOR2Q8IZ40 523 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 CCL4L1Q8NHW4 92 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 SCAMP4Q969E2 229 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 CCDC74AQ96AQ1 378 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 GRAMD1AQ96CP6 724 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 IMP4Q96G21 291 aaKnown RBP21.15■□□□□ 0.98
HMGB3-205ENST00000455596 DPEP2Q9H4A9 486 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 SUDS3Q9H7L9 328 aaPredicted RBP21.15■□□□□ 0.98
HMGB3-205ENST00000455596 SUFUQ9UMX1 484 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 SCN8AQ9UQD0 1980 aa21.15■□□□□ 0.98
HMGB3-205ENST00000455596 ACTN2P35609 894 aa21.14■□□□□ 0.97
HMGB3-205ENST00000455596 GNPDA1P46926 289 aa21.14■□□□□ 0.97
HMGB3-205ENST00000455596 SPIDRQ14159 915 aa21.14■□□□□ 0.97
HMGB3-205ENST00000455596 GALNT3Q14435 633 aa21.14■□□□□ 0.97
HMGB3-205ENST00000455596 PRKD1Q15139 912 aaPredicted RBP21.14■□□□□ 0.97
HMGB3-205ENST00000455596 LLGL1Q15334 1064 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms