RNA–Protein interactions for RNA: ENST00000454994.3

AL139260.3-202, humanhuman

TSL 2

Gene AL139260.3, Length 2,381 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139260.3-202ENST00000454994 CKBP12277 381 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 IMPDH1P20839 514 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 ATP6V1B2P21281 511 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 NDST2P52849 883 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 XIAPP98170 497 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 ROR2Q01974 943 aaKnown RBP13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 TRIM25Q14258 630 aaKnown RBP13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 CTXN3Q4LDR2 81 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 FAM171A1Q5VUB5 890 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 HMBOX1Q6NT76 420 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 APLFQ8IW19 511 aaPredicted RBP13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 MARVELD2Q8N4S9 558 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 CALML6Q8TD86 181 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 ASB9Q96DX5 294 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 C1orf74Q96LT6 269 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 BTBD9Q96Q07 612 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 SLC29A1Q99808 456 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 CIB1Q99828 191 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 GPR62Q9BZJ7 368 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 TUBB1Q9H4B7 451 aa13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 SEMA4BQ9NPR2 832 aaPredicted RBP13.55□□□□□ -0.24
AL139260.3-202ENST00000454994 FAM149AA5PLN7 773 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 WASH4PA8MWX3 477 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 CDK14O94921 469 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SNRPB2P08579 225 aaKnown RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 RBP1P09455 135 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 CKMT2P17540 419 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 PRDX3P30048 256 aaKnown RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 FMO4P31512 558 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 POLD2P49005 469 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SP3Q02447 781 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 RFTN1Q14699 578 aaPredicted RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 CYTH1Q15438 398 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 UGT3A2Q3SY77 523 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 COLGALT2Q8IYK4 626 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 MYO1HQ8N1T3 1032 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 ZNF512Q96ME7 567 aaPredicted RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SLC30A3Q99726 388 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 NOL11Q9H8H0 719 aaKnown RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 TIMM22Q9Y584 194 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 PLOD2O00469 737 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SLC7A4O43246 635 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 DENRO43583 198 aaKnown RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 TPST1O60507 370 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 VNN2O95498 520 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 GLP2RO95838 553 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 TFAP2AP05549 437 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 MTHFD2P13995 350 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 CAPN3P20807 821 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 FDXRP22570 491 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SLC6A4P31645 630 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 HTR7P34969 479 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 AGTR2P50052 363 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 DSC1Q08554 894 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SERINC3Q13530 473 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 ZNF235Q14590 738 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SLC14A2Q15849 920 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 NADK2Q4G0N4 442 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 MSANTD2Q6P1R3 559 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SLC24A5Q71RS6 500 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 NUDT8Q8WV74 236 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 TSPAN17Q96FV3 270 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 RANBP9Q96S59 729 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 UNC93B1Q9H1C4 597 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 SPAG4Q9NPE6 437 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 CNOT6Q9ULM6 557 aaKnown RBP13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 AP4S1Q9Y587 144 aa13.54□□□□□ -0.24
AL139260.3-202ENST00000454994 LOC285095A0A1B0GVY8 99 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 CCDC160A6NGH7 325 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 GFAPP14136 432 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 ZNF26P17031 533 aaPredicted RBP13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 ZNF37AP17032 561 aaPredicted RBP13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 GRIA3P42263 894 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 SGSHP51688 502 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 HERVK_113P63132 956 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 FAM189BP81408 668 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 SATB1Q01826 763 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 ZFP1Q6P2D0 407 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 TMEM173Q86WV6 379 aaPredicted RBP13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 LGI2Q8N0V4 545 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 TEX26Q8N6G2 289 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 TWIST2Q8WVJ9 160 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 BTN2A3PQ96KV6 586 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 SPON2Q9BUD6 331 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 ERVK-6Q9BXR3 956 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 ASB1Q9Y576 335 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 A0A0J9YYE9 177 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 SUPT3HB4E1H0 165 aa13.53□□□□□ -0.24
AL139260.3-202ENST00000454994 CDC7O00311 574 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms