RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 A8MT66 165 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 LEFTY2O00292 366 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 GPC4O75487 556 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 IPO13O94829 963 aaKnown RBP13.65□□□□□ -0.22
CLK3-203ENST00000454830 STK19P49842 368 aaPredicted RBP13.65□□□□□ -0.22
CLK3-203ENST00000454830 STC1P52823 247 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 MSLNQ13421 630 aaPredicted RBP13.65□□□□□ -0.22
CLK3-203ENST00000454830 TMEM198Q66K66 360 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 FAM151BQ6UXP7 276 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 LMNTD2Q8IXW0 634 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 ING5Q8WYH8 240 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 TCEAL4Q96EI5 215 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 MYO19Q96H55 970 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 GPR21Q99679 349 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 SLC46A2Q9BY10 475 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
CLK3-203ENST00000454830 C1orf232A0A0U1RR37 186 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 AIM2O14862 343 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 OR1I1O60431 355 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 PRLP01236 227 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 CD70P32970 193 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 LMAN2Q12907 356 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 KPNB1Q14974 876 aaKnown RBP13.65□□□□□ -0.23
CLK3-203ENST00000454830 MPPE1Q53F39 396 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 PIWIL4Q7Z3Z4 852 aaKnown RBP13.65□□□□□ -0.23
CLK3-203ENST00000454830 TMPRSS6Q8IU80 811 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 NAT16Q8N8M0 369 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 GPR78Q96P69 363 aa13.65□□□□□ -0.23
CLK3-203ENST00000454830 NLE1Q9NVX2 485 aaPredicted RBP13.65□□□□□ -0.23
CLK3-203ENST00000454830 MYLKQ15746 1914 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 CFLARO15519 480 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 RPSAP08865 295 aaKnown RBP13.64□□□□□ -0.23
CLK3-203ENST00000454830 TECRLQ5HYJ1 363 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 PSAPL1Q6NUJ1 521 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 ZNF549Q6P9A3 640 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 PAQR3Q6TCH7 311 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 PTGR2Q8N8N7 351 aaPredicted RBP13.64□□□□□ -0.23
CLK3-203ENST00000454830 ST13P5Q8NFI4 369 aaPredicted RBP13.64□□□□□ -0.23
CLK3-203ENST00000454830 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.64□□□□□ -0.237e-11■■■■■ 32
CLK3-203ENST00000454830 ASIC4Q96FT7 647 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 TRIB3Q96RU7 358 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 CCDC106Q9BWC9 280 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
CLK3-203ENST00000454830 TRMT6Q9UJA5 497 aaKnown RBP13.64□□□□□ -0.23
CLK3-203ENST00000454830 RNF112Q9ULX5 631 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 CCL26Q9Y258 94 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 PER2O15055 1255 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 KIAA0355O15063 1070 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 CES1P23141 567 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 PRKAA2P54646 552 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 FPGSQ05932 587 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 CBX2Q14781 532 aaPredicted RBP13.64□□□□□ -0.23
CLK3-203ENST00000454830 TEAD2Q15562 447 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 LRRC73Q5JTD7 316 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 C1orf146Q5VVC0 180 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 LCA5Q86VQ0 697 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 BBS2Q9BXC9 721 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 KIAA1522Q9P206 1035 aaPredicted RBP13.64□□□□□ -0.23
CLK3-203ENST00000454830 MYOFQ9NZM1 2061 aa13.64□□□□□ -0.23
CLK3-203ENST00000454830 F8W8V4 182 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 UBXN8O00124 270 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 NIPSNAP2O75323 286 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 BAIAP3O94812 1187 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 SIX3O95343 332 aaPredicted RBP13.63□□□□□ -0.23
CLK3-203ENST00000454830 CR2P20023 1033 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 NTHL1P78549 312 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 ACAP2Q15057 778 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 LSM12Q3MHD2 195 aaKnown RBP13.63□□□□□ -0.23
CLK3-203ENST00000454830 TMEM207Q6UWW9 146 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 PIANPQ8IYJ0 282 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 DCAF4L2Q8NA75 395 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 CMTM5Q96DZ9 223 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 CCDC126Q96EE4 140 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 ABCG8Q9H221 673 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 STN1Q9H668 368 aaKnown RBP13.63□□□□□ -0.23
CLK3-203ENST00000454830 EML4Q9HC35 981 aaKnown RBP13.63□□□□□ -0.23
CLK3-203ENST00000454830 PACSIN3Q9UKS6 424 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 ATP6AP2A0A1C7CYW4 349 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 VPS26AO75436 327 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 ATP6AP2O75787 350 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 JUNP05412 331 aaKnown RBP13.63□□□□□ -0.23
CLK3-203ENST00000454830 PYGLP06737 847 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 CCND1P24385 295 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 RAD51Q06609 339 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 PPIGQ13427 754 aaKnown RBP eCLIP13.63□□□□□ -0.234e-7■■■□□ 16.8
CLK3-203ENST00000454830 TBCCQ15814 346 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 FAM219BQ5XKK7 198 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 NCEH1Q6PIU2 408 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 EPGNQ6UW88 154 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 C7orf61Q8IZ16 206 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 TMEM151AQ8N4L1 468 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 TADA1Q96BN2 335 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 PIDD1Q9HB75 910 aa13.63□□□□□ -0.23
CLK3-203ENST00000454830 LHX3Q9UBR4 397 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms