RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PRAMEF12O95522 483 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 ATP5BP06576 529 aaKnown RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 MC4RP32245 332 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 LAMB3Q13751 1172 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 PFKFB4Q16877 469 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 ALG1LQ6GMV1 187 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 RIPOR1Q6ZS17 1223 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 BBS7Q8IWZ6 715 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 PIANPQ8IYJ0 282 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 SNX31Q8N9S9 440 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 KDM1BQ8NB78 822 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 MRPS31Q92665 395 aaKnown RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 DCLRE1BQ9H816 532 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 IL21Q9HBE4 155 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 NLE1Q9NVX2 485 aaPredicted RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 C15orf41Q9Y2V0 281 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 SH3BP1Q9Y3L3 701 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 UBXN8O00124 270 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 LUC7L3O95232 432 aaKnown RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 CXCL14O95715 111 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 LPOP22079 712 aaPredicted RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 CPOXP36551 454 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 ZNF140P52738 457 aaPredicted RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 PRKAA2P54646 552 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 PFKPQ01813 784 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 TAF1AQ15573 450 aaPredicted RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 PTPRNQ16849 979 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 WLSQ5T9L3 541 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 C6orf163Q5TEZ5 329 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 ITIH5Q86UX2 942 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 SNX32Q86XE0 403 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 HJURPQ8NCD3 748 aaPredicted RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 SLC22A17Q8WUG5 538 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 TNKS2Q9H2K2 1166 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 GALPQ9UBC7 116 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 CHD7Q9P2D1 2997 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 EIF4E1BA6NMX2 242 aaKnown RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 H3BMM5 538 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 PPP6CO00743 305 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 CCL16O15467 120 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 PTDSS1P48651 473 aaKnown RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 TIAL1Q01085 375 aaKnown RBP eCLIP11.76□□□□□ -0.53
VTA1-203ENST00000452973 ACVR1Q04771 509 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 RFTN1Q14699 578 aaPredicted RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 TCHHL1Q5QJ38 904 aaPredicted RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 PANX3Q96QZ0 392 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 GPR63Q9BZJ6 419 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 EBF2Q9HAK2 575 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 EVLQ9UI08 416 aaPredicted RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 C5orf42Q9H799 3197 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 TIMP1P01033 207 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 C8AP07357 584 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 GFAPP14136 432 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 ZNF37AP17032 561 aaPredicted RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 FDXRP22570 491 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 NUDT2P50583 147 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 SULT2A1Q06520 285 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 NSUN2Q08J23 767 aaKnown RBP eCLIP11.76□□□□□ -0.53
VTA1-203ENST00000452973 CUZD1Q86UP6 607 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 LMNTD2Q8IXW0 634 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 KLHL23Q8NBE8 558 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 GPR21Q99679 349 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 MMADHCQ9H3L0 296 aaPredicted RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 HSFX1Q9UBD0 423 aa11.76□□□□□ -0.53
VTA1-203ENST00000452973 LSM7Q9UK45 103 aaKnown RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
VTA1-203ENST00000452973 A0A088AWK7 358 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 IQCF5A8MTL0 148 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 CFLARO15519 480 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 MAGEC1O60732 1142 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 NIPSNAP2O75323 286 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 PSMG1O95456 288 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 BAG2O95816 211 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 CD1DP15813 335 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 PIK3R1P27986 724 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 CDC25CP30307 473 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 PPP3CCP48454 512 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 NAA25Q14CX7 972 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 OR4D1Q15615 310 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 SWT1Q5T5J6 900 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 TRIM68Q6AZZ1 485 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 PTGR2Q8N8N7 351 aaPredicted RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 CNDP1Q96KN2 507 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 TTC1Q99614 292 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 AARSD1Q9BTE6 412 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 RC3H2Q9HBD1 1191 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 LHX3Q9UBR4 397 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 WASF2Q9Y6W5 498 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 ANAPC1Q9H1A4 1944 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 NPHS1O60500 1241 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 SMIM24O75264 130 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 CHRM3P20309 590 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 DNAJB1P25685 340 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 C1QTNF8P60827 252 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms